Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43510 | Soybean | nucleus, plastid | 85.96 | 84.97 |
| PGSC0003DMT400017556 | Potato | nucleus | 33.33 | 79.72 |
| KRH25207 | Soybean | nucleus | 30.12 | 69.59 |
| KRH27491 | Soybean | nucleus, plastid | 63.74 | 61.93 |
| VIT_13s0064g01060.t01 | Wine grape | nucleus | 61.4 | 61.22 |
| KRH20837 | Soybean | nucleus, plastid | 62.87 | 60.22 |
| Solyc01g087050.2.1 | Tomato | nucleus | 50.0 | 57.38 |
| KRH18924 | Soybean | nucleus | 38.3 | 55.27 |
| KRH16750 | Soybean | nucleus | 38.6 | 53.01 |
| KRH10191 | Soybean | nucleus, plastid | 52.05 | 51.59 |
| KRG95308 | Soybean | nucleus, plastid | 52.05 | 51.0 |
| KRH24697 | Soybean | nucleus, plastid | 50.58 | 50.73 |
| KRH29701 | Soybean | nucleus | 50.0 | 50.15 |
| KRH66988 | Soybean | nucleus | 52.34 | 50.0 |
| KRH23146 | Soybean | nucleus, plastid | 51.17 | 50.0 |
| KRH22690 | Soybean | nucleus | 45.03 | 48.28 |
| KRH71956 | Soybean | nucleus, plastid | 52.34 | 48.25 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 43.57 | 48.06 |
| KRH26622 | Soybean | nucleus | 44.44 | 47.35 |
| KRH34760 | Soybean | nucleus | 37.72 | 47.25 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 50.29 | 47.12 |
| KRG92027 | Soybean | nucleus | 37.72 | 47.08 |
| KRH33045 | Soybean | nucleus, plastid | 52.34 | 46.37 |
| KRH30442 | Soybean | nucleus | 44.44 | 46.06 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 48.83 | 45.38 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 48.83 | 45.14 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 48.83 | 45.14 |
| Zm00001d036812_P001 | Maize | nucleus | 49.12 | 43.19 |
| Zm00001d046774_P001 | Maize | nucleus | 49.12 | 42.21 |
| EER88644 | Sorghum | nucleus, plastid | 49.71 | 42.08 |
| KRH70598 | Soybean | nucleus | 40.06 | 41.02 |
| KRH75477 | Soybean | nucleus | 39.47 | 40.66 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 49.12 | 37.75 |
| KRH25208 | Soybean | nucleus, plastid | 14.91 | 29.14 |
| KRH22822 | Soybean | plastid | 17.25 | 21.22 |
| KRH43171 | Soybean | nucleus, plastid | 18.71 | 20.13 |
| KRG97571 | Soybean | nucleus, plastid | 19.88 | 20.12 |
| KRH59322 | Soybean | nucleus | 18.42 | 19.27 |
| KRH31302 | Soybean | nucleus, plastid | 20.47 | 19.23 |
| KRH25115 | Soybean | nucleus | 19.59 | 16.92 |
| KRH30553 | Soybean | nucleus, plastid | 20.18 | 16.83 |
| KRH26538 | Soybean | nucleus, plastid | 19.01 | 15.85 |
| KRH08551 | Soybean | nucleus, plastid | 23.98 | 15.74 |
| KRH34957 | Soybean | nucleus, plastid | 23.1 | 15.58 |
| KRG91822 | Soybean | nucleus, plastid | 22.81 | 15.32 |
Protein Annotations
| EntrezGene:100789060 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02009800 | EnsemblPlantsGene:GLYMA_15G273400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | UniProt:I1MJN0 | InterPro:IPR013087 | EnsemblPlants:KRH13927 | ProteinID:KRH13927 |
| ProteinID:KRH13927.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF72 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233AB90 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:-:51080569..51082893
Molecular Weight (calculated)
38494.2 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.726
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPKSNVYT ETFNFMPLYS HHSSFTSQSS LLSSYPLSYS NTNTNTFSNQ SDTSSSSCAA PPPSSPLREA LPLINNIKQK KNEPSNGGEE VEEEGQKKRD
101: IDETLLTSIT EEGDDDETVT VALQIGLPSV ATSDLNGSRK IFEACAKMDV KEDVRVISGH PLDRLNNIQY WIPTPSQILI GPTQFLCHVC SKSFNRYNNL
201: QMHMWGHGSQ YRKGPDSLKG TQPSAMLRLP CFCCAPGCKH NIDHPRTRPL KDFRTLQTHY KRKHGIKPYM CRKCDKTFAV KGDWRTHEKN CGITWYCLCG
301: SDFKHKRSLK DHIKAFGHDH GVVDIDCMQE DEAASEIEHD GG
101: IDETLLTSIT EEGDDDETVT VALQIGLPSV ATSDLNGSRK IFEACAKMDV KEDVRVISGH PLDRLNNIQY WIPTPSQILI GPTQFLCHVC SKSFNRYNNL
201: QMHMWGHGSQ YRKGPDSLKG TQPSAMLRLP CFCCAPGCKH NIDHPRTRPL KDFRTLQTHY KRKHGIKPYM CRKCDKTFAV KGDWRTHEKN CGITWYCLCG
301: SDFKHKRSLK DHIKAFGHDH GVVDIDCMQE DEAASEIEHD GG
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.