Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88644 | Sorghum | nucleus, plastid | 84.83 | 81.68 |
| Zm00001d046774_P001 | Maize | nucleus | 83.55 | 81.66 |
| PGSC0003DMT400017556 | Potato | nucleus | 28.79 | 78.32 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 67.35 | 71.2 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 67.35 | 70.81 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 66.84 | 70.27 |
| CDY57608 | Canola | nucleus | 40.62 | 65.83 |
| Bra003295.1-P | Field mustard | nucleus | 41.13 | 65.04 |
| CDX67704 | Canola | nucleus | 41.13 | 65.04 |
| Solyc11g062060.1.1 | Tomato | nucleus | 42.42 | 63.22 |
| Solyc01g087050.2.1 | Tomato | nucleus | 47.04 | 61.41 |
| VIT_06s0004g01870.t01 | Wine grape | nucleus | 50.64 | 58.98 |
| Bra007346.1-P | Field mustard | nucleus | 46.53 | 58.96 |
| VIT_08s0007g08070.t01 | Wine grape | nucleus | 52.19 | 58.84 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 50.9 | 58.24 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 66.58 | 58.2 |
| PGSC0003DMT400077822 | Potato | nucleus | 47.3 | 57.86 |
| KRG95308 | Soybean | nucleus, plastid | 51.41 | 57.31 |
| PGSC0003DMT400035408 | Potato | nucleus | 50.39 | 56.48 |
| CDX88959 | Canola | nucleus | 52.7 | 56.32 |
| Bra014612.1-P | Field mustard | nucleus, plastid | 52.7 | 56.32 |
| CDX72006 | Canola | nucleus | 53.73 | 56.03 |
| CDY06083 | Canola | nucleus | 53.73 | 55.88 |
| KRH66988 | Soybean | nucleus | 51.41 | 55.87 |
| KRH24697 | Soybean | nucleus, plastid | 48.33 | 55.13 |
| VIT_13s0064g01060.t01 | Wine grape | nucleus | 48.59 | 55.1 |
| KRH29701 | Soybean | nucleus | 48.07 | 54.84 |
| AT3G57670.1 | Thale cress | nucleus | 53.98 | 54.83 |
| KRH10191 | Soybean | nucleus, plastid | 47.81 | 53.91 |
| KRH71956 | Soybean | nucleus, plastid | 51.41 | 53.91 |
| KRH23146 | Soybean | nucleus, plastid | 47.81 | 53.14 |
| CDY06390 | Canola | nucleus | 45.5 | 52.99 |
| AT1G51220.1 | Thale cress | nucleus | 45.5 | 52.52 |
| Bra030450.1-P | Field mustard | nucleus | 45.24 | 51.76 |
| KRH27491 | Soybean | nucleus, plastid | 46.79 | 51.7 |
| CDY29624 | Canola | nucleus | 44.99 | 51.47 |
| KRH33045 | Soybean | nucleus, plastid | 50.9 | 51.3 |
| CDY25224 | Canola | nucleus | 44.47 | 51.18 |
| CDY22834 | Canola | nucleus, plastid | 44.47 | 51.18 |
| Bra018902.1-P | Field mustard | plastid | 43.7 | 50.45 |
| CDY35565 | Canola | nucleus | 43.96 | 50.44 |
| KRH20837 | Soybean | nucleus, plastid | 46.27 | 50.42 |
| Bra023918.1-P | Field mustard | nucleus | 46.53 | 50.42 |
| CDY57920 | Canola | nucleus | 46.53 | 50.42 |
| CDY27556 | Canola | nucleus | 46.27 | 50.28 |
| KRH43510 | Soybean | nucleus, plastid | 44.47 | 50.0 |
| Bra031239.1-P | Field mustard | nucleus | 46.02 | 49.86 |
| KRH13927 | Soybean | nucleus, plastid | 43.19 | 49.12 |
| Zm00001d052883_P001 | Maize | nucleus | 49.61 | 46.51 |
| Zm00001d020923_P001 | Maize | nucleus | 51.93 | 46.01 |
| Zm00001d031416_P001 | Maize | nucleus | 49.61 | 45.63 |
| Solyc03g059270.2.1 | Tomato | nucleus | 38.56 | 43.86 |
| AT3G20880.1 | Thale cress | nucleus | 45.5 | 42.96 |
| Zm00001d005566_P001 | Maize | nucleus | 38.56 | 39.58 |
| Zm00001d038297_P001 | Maize | nucleus | 39.59 | 39.29 |
| Zm00001d042781_P001 | Maize | nucleus | 39.85 | 38.37 |
| Zm00001d020037_P001 | Maize | nucleus | 36.5 | 37.77 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 38.05 | 37.56 |
| Zm00001d034783_P001 | Maize | nucleus | 18.77 | 19.95 |
| Zm00001d031895_P001 | Maize | nucleus | 19.28 | 17.9 |
| Zm00001d016911_P001 | Maize | nucleus | 17.48 | 16.27 |
| Zm00001d023558_P001 | Maize | nucleus | 18.51 | 15.42 |
| Zm00001d042686_P001 | Maize | nucleus | 19.28 | 14.48 |
| Zm00001d012260_P001 | Maize | nucleus | 19.02 | 14.26 |
Protein Annotations
| EntrezGene:100272543 | MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:AQK82000.1 | UniProt:B4FP77 | EMBL:BT038915 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | PFAM:PF00096 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF61 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00017B7C6E |
| EnsemblPlantsGene:Zm00001d036812 | EnsemblPlants:Zm00001d036812_P001 | EnsemblPlants:Zm00001d036812_T001 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
Zinc finger protein WIP2
Coordinates
chr6:-:101681449..101689673
Molecular Weight (calculated)
42635.2 Da
IEP (calculated)
7.147
GRAVY (calculated)
-0.822
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDPYDTNFL RGYYSHFPPS NAPPATSFPS SYCASSYLHH PPPPSPPIRE ALPLLSNLTP SSSGTNHHHH QHCGGDVQDH KDCTHATSCS DDQEAAGEVT
101: VALHIGLPSP SPSPSESAAD GGENQEQAAE GRSLQEQGGE EEEEEAAAMP VGCASIVGIG RLTKGQYWIP TPSQILIGPT QFSCPVCYKT FNRYNNMQMH
201: MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAAGCRNNID HPRARPLKDF RTLQTHYRRR HGIKPFMCRK CGKPFAVRGD WRTHEKNCGR LWYCACGSDF
301: KHKRSLKDHI RAFGRGHAAC GVDDCFDDDD DRDDPSSSEV DHAATNTTSN STTTTAAAAN AHHHHHTSWK PPPPPLSSSS RGSGDDRLL
101: VALHIGLPSP SPSPSESAAD GGENQEQAAE GRSLQEQGGE EEEEEAAAMP VGCASIVGIG RLTKGQYWIP TPSQILIGPT QFSCPVCYKT FNRYNNMQMH
201: MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAAGCRNNID HPRARPLKDF RTLQTHYRRR HGIKPFMCRK CGKPFAVRGD WRTHEKNCGR LWYCACGSDF
301: KHKRSLKDHI RAFGRGHAAC GVDDCFDDDD DRDDPSSSEV DHAATNTTSN STTTTAAAAN AHHHHHTSWK PPPPPLSSSS RGSGDDRLL
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.