Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15412 | Sorghum | nucleus | 89.36 | 88.32 |
| Zm00001d052883_P001 | Maize | nucleus | 84.87 | 86.51 |
| Os08t0504000-01 | Rice | nucleus | 66.9 | 64.61 |
| Zm00001d020923_P001 | Maize | nucleus | 60.52 | 58.31 |
| Zm00001d036812_P001 | Maize | nucleus | 45.63 | 49.61 |
| Zm00001d046774_P001 | Maize | nucleus | 44.92 | 47.74 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 34.52 | 37.06 |
| Zm00001d038297_P001 | Maize | nucleus | 34.28 | 36.99 |
| Zm00001d020037_P001 | Maize | nucleus | 32.62 | 36.7 |
| Zm00001d005566_P001 | Maize | nucleus | 31.91 | 35.62 |
| Zm00001d042781_P001 | Maize | nucleus | 33.33 | 34.9 |
| Zm00001d034783_P001 | Maize | nucleus | 17.26 | 19.95 |
| Zm00001d016911_P001 | Maize | nucleus | 17.02 | 17.22 |
| Zm00001d023558_P001 | Maize | nucleus | 18.2 | 16.49 |
| Zm00001d031895_P001 | Maize | nucleus | 15.6 | 15.75 |
| Zm00001d042686_P001 | Maize | nucleus | 18.44 | 15.06 |
| Zm00001d012260_P001 | Maize | nucleus | 18.2 | 14.84 |
Protein Annotations
| EnsemblPlants:Zm00001d031416_P001 | EnsemblPlants:Zm00001d031416_T001 | EnsemblPlantsGene:Zm00001d031416 | EntrezGene:103641945 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF68 | PFscan:PS50157 | ProteinID:ONM02822.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI000221C6B8 | UniProt:A0A1D6KIK8 | MapMan:15.5.15 | : | : |
Description
Zinc finger protein WIP2
Coordinates
chr1:+:189440085..189443079
Molecular Weight (calculated)
45641.4 Da
IEP (calculated)
6.292
GRAVY (calculated)
-0.570
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPYTSFFK NSYYYYASSY PAAPAPHRLP PPIPPYTTLY PAAAPQYHHP ACFFQPPAPT LPPPLNDSPP SPPLREALPL LSQSPTRAAS RARPHPHVAV
101: DSDSDDDADD FLLREAAVGS SVTPSASTRA PLFADLNRVP SCCDDDGGGD PMDLEPAVAL RIGLPPAPAN GCGAPEADLL SGLSGRAGCG GMEAEEDEDE
201: CKVGDGDEVV PLGFASTPIG SLNKGQYWIP TPAQILIGPT QFSCPVCYKT FNRYNNMQMH MWGHGSQYRK GPESLRGVQP TAMLRLPCYC CAPGCRNNID
301: HPRARPLKDF RTLQTHYKRK HGLKPFLCRK CGKAFAVKGD WRTHEKNCGR LWYCLCGSEF KHKRSLKDHA RAFGHGHGAF GCNNLDGDGD GDGGAGGGAN
401: GLDDDDDDGA VSEIEHDYCA AAR
101: DSDSDDDADD FLLREAAVGS SVTPSASTRA PLFADLNRVP SCCDDDGGGD PMDLEPAVAL RIGLPPAPAN GCGAPEADLL SGLSGRAGCG GMEAEEDEDE
201: CKVGDGDEVV PLGFASTPIG SLNKGQYWIP TPAQILIGPT QFSCPVCYKT FNRYNNMQMH MWGHGSQYRK GPESLRGVQP TAMLRLPCYC CAPGCRNNID
301: HPRARPLKDF RTLQTHYKRK HGLKPFLCRK CGKAFAVKGD WRTHEKNCGR LWYCLCGSEF KHKRSLKDHA RAFGHGHGAF GCNNLDGDGD GDGGAGGGAN
401: GLDDDDDDGA VSEIEHDYCA AAR
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.