Factsheet for Zm00001d052883_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15412	Sorghum	nucleus	89.64	86.92
Zm00001d031416_P001	Maize	nucleus	86.51	84.87
Os08t0504000-01	Rice	nucleus	66.75	63.24
Zm00001d020923_P001	Maize	nucleus	62.17	58.77
Zm00001d036812_P001	Maize	nucleus	46.51	49.61
Zm00001d046774_P001	Maize	nucleus	45.78	47.74
Zm00001d010131_P001	Maize	nucleus, plastid	35.66	37.56
Zm00001d038297_P001	Maize	nucleus	35.42	37.5
Zm00001d020037_P001	Maize	nucleus	33.01	36.44
Zm00001d042781_P001	Maize	nucleus	34.7	35.64
Zm00001d005566_P001	Maize	nucleus	32.53	35.62
Zm00001d034783_P001	Maize	nucleus	17.59	19.95
Zm00001d031895_P001	Maize	nucleus	16.87	16.71
Zm00001d016911_P001	Maize	nucleus	16.63	16.51
Zm00001d023558_P001	Maize	nucleus	18.31	16.27
Zm00001d042686_P001	Maize	nucleus	18.31	14.67
Zm00001d012260_P001	Maize	nucleus	18.07	14.45

Protein Annotations

EnsemblPlants:Zm00001d052883_P001	EnsemblPlants:Zm00001d052883_T001	EnsemblPlantsGene:Zm00001d052883	EntrezGene:103654491	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593
PANTHER:PTHR10593:SF68	PFscan:PS50157	ProteinID:AQK58275.1	ScanProsite:PS00028	SEG:seg	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI000221ABB6	UniProt:K7U4J6	MapMan:15.5.15	:	:

Description

Zinc finger protein WIP2

Coordinates

chr4:+:203324761..203327583

Molecular Weight (calculated)

44989.6 Da

IEP (calculated)

6.542

GRAVY (calculated)

-0.572

Length

415 amino acids

Sequence
(BLAST)

001: MEDPYTSFFK SSYYYYGSSY PAAPAPHHLP PYTTLYPAAA SHQYPACFFQ PPPLPLHEHD SPPSPPLREA LPLLSQSPTR AASRARRPRP HVAVDSDSED
101: GADDFLREGA VGSSVAPSTT TTRAPLFADL NCMPSCCDDD PMDLEAAAAA PTDDDADDAA VALRIGLPPA PVNGCGGAGS DLRSGLSGRG ACGGMEAEED
201: EDECNKVGDG DGDEVVPLGF ASTPIGRLNK GQYWIPTPAQ ILIGPTQFSC PVCYKTFNRY NNMQMHMWGH GSQYRKGPES LRGVQPTAML RLPCYCCAPG
301: CRNNIDHPRA RPLKDFRTLQ THYKRKHGLK PFLCRKCGKA FAVKGDWRTH EKNCGRLWYC LCGSEFKHKR SLKDHARAFG HGHGGAFGCN LAGADGLDDD
401: DDGAVSDIEH DCAAR

Best Arabidopsis Sequence Match ( AT3G57670.1 )
(BLAST)

001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK

Arabidopsis Description

WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.