Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g062060.1.1 | Tomato | nucleus | 58.98 | 75.48 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 64.07 | 68.81 |
| PGSC0003DMT400035408 | Potato | nucleus | 69.16 | 66.57 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 64.37 | 66.56 |
| VIT_08s0007g08070.t01 | Wine grape | nucleus | 67.37 | 65.22 |
| GSMUA_AchrUn_... | Banana | plastid | 61.38 | 62.69 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 55.99 | 62.33 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 59.28 | 61.49 |
| KRH10191 | Soybean | nucleus, plastid | 63.47 | 61.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.87 | 61.05 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 62.28 | 61.0 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 58.08 | 60.81 |
| VIT_13s0064g01060.t01 | Wine grape | nucleus | 61.98 | 60.35 |
| KRH23146 | Soybean | nucleus, plastid | 62.87 | 60.0 |
| KRH29701 | Soybean | nucleus | 61.08 | 59.82 |
| KRH24697 | Soybean | nucleus, plastid | 60.48 | 59.24 |
| AT1G51220.1 | Thale cress | nucleus | 56.29 | 55.79 |
| CDY06390 | Canola | nucleus | 55.39 | 55.39 |
| Bra030450.1-P | Field mustard | nucleus | 56.29 | 55.29 |
| CDY35565 | Canola | nucleus | 55.99 | 55.16 |
| CDY29624 | Canola | nucleus | 55.69 | 54.71 |
| CDY22834 | Canola | nucleus, plastid | 55.09 | 54.44 |
| Bra018902.1-P | Field mustard | plastid | 54.79 | 54.3 |
| VIT_18s0001g05860.t01 | Wine grape | nucleus | 44.31 | 54.21 |
| CDY25224 | Canola | nucleus | 54.79 | 54.14 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 58.38 | 52.99 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 58.38 | 52.7 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 58.08 | 52.43 |
| VIT_01s0011g03100.t01 | Wine grape | nucleus | 43.11 | 52.36 |
| Bra031239.1-P | Field mustard | nucleus | 55.99 | 52.09 |
| Bra023918.1-P | Field mustard | nucleus | 55.99 | 52.09 |
| CDY57920 | Canola | nucleus | 55.99 | 52.09 |
| CDY27556 | Canola | nucleus | 55.69 | 51.96 |
| Zm00001d036812_P001 | Maize | nucleus | 58.98 | 50.64 |
| Zm00001d046774_P001 | Maize | nucleus | 59.88 | 50.25 |
| EER88644 | Sorghum | nucleus, plastid | 60.78 | 50.25 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 47.31 | 45.53 |
| AT3G20880.1 | Thale cress | nucleus | 55.69 | 45.15 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 59.88 | 44.94 |
| VIT_06s0061g00780.t01 | Wine grape | nucleus | 20.06 | 17.18 |
| VIT_18s0072g00840.t01 | Wine grape | nucleus | 24.85 | 15.75 |
| VIT_07s0141g00020.t01 | Wine grape | vacuole | 19.16 | 15.24 |
Protein Annotations
| EntrezGene:100245035 | wikigene:100245035 | MapMan:15.5.15 | Gene3D:3.30.160.60 | ProteinID:CCB43723 | ProteinID:CCB43723.1 |
| UniProt:F6GU81 | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:IPR013087 | EntrezGene:LOC100245035 | wikigene:LOC100245035 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF98 | SMART:SM00355 | SUPFAM:SSF57667 | TIGR:TC61344 | UniParc:UPI00015C761D | ArrayExpress:VIT_06s0004g01870 |
| EnsemblPlantsGene:VIT_06s0004g01870 | EnsemblPlants:VIT_06s0004g01870.t01 | unigene:Vvi.11905 | RefSeq:XP_002282950 | RefSeq:XP_002282950.1 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:2295976..2298207
Molecular Weight (calculated)
37722.0 Da
IEP (calculated)
7.304
GRAVY (calculated)
-0.780
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPYSNYSN GWFNLNPLYH ISSSPSSSDQ SLCSPRYDFN KLYYNNFNTN NYHYSPPSPP LREALPLLSL GPTRYDEQES SCNTAMEVDM NKGKEETTLS
101: SSADDETVTV ALHLGLPSPS STDLISRLSS SETEDKEEVT VASGYSSTGS TLIKGQYWIP TPSQILIGPT QFACPLCFKT FNRYNNMQMH MWGHGSQYRK
201: GPESLRGTQP TAMLKLPCFC CAPGCRNNID HPRSRPLKDF RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCACGSDF KHKRSLKDHI
301: KAFGHGHAAY GIDCFEEEDE PASEIEQDNE SSHS
101: SSADDETVTV ALHLGLPSPS STDLISRLSS SETEDKEEVT VASGYSSTGS TLIKGQYWIP TPSQILIGPT QFACPLCFKT FNRYNNMQMH MWGHGSQYRK
201: GPESLRGTQP TAMLKLPCFC CAPGCRNNID HPRSRPLKDF RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCACGSDF KHKRSLKDHI
301: KAFGHGHAAY GIDCFEEEDE PASEIEQDNE SSHS
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.