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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G304000.1 Wheat nucleus 97.84 97.84
TraesCS7A01G404400.1 Wheat nucleus 96.22 96.74
PGSC0003DMT400017556 Potato nucleus 29.73 76.92
EER88644 Sorghum nucleus, plastid 75.14 68.81
Zm00001d046774_P001 Maize nucleus 72.43 67.34
Zm00001d036812_P001 Maize nucleus 70.27 66.84
CDY57608 Canola nucleus 42.7 65.83
Bra003295.1-P Field mustard nucleus 43.24 65.04
CDX67704 Canola nucleus 43.24 65.04
Solyc11g062060.1.1 Tomato nucleus 44.59 63.22
Os06t0612300-01 Rice endoplasmic reticulum, vacuole 72.7 60.45
Bra007346.1-P Field mustard nucleus 49.19 59.28
Solyc01g087050.2.1 Tomato nucleus 47.57 59.06
GSMUA_Achr3P11870_001 Banana nucleus 54.05 58.82
PGSC0003DMT400077822 Potato nucleus 50.27 58.49
VIT_06s0004g01870.t01 Wine grape nucleus 52.43 58.08
VIT_08s0007g08070.t01 Wine grape nucleus 54.05 57.97
KRG95308 Soybean nucleus, plastid 53.51 56.73
CDX88959 Canola nucleus 55.14 56.04
CDX72006 Canola nucleus 56.49 56.03
CDY06083 Canola nucleus 56.49 55.88
Bra014612.1-P Field mustard nucleus, plastid 54.86 55.77
KRH66988 Soybean nucleus 53.51 55.31
PGSC0003DMT400035408 Potato nucleus 51.35 54.76
TraesCS5D01G179700.1 Wheat nucleus 45.41 54.55
VIT_13s0064g01060.t01 Wine grape nucleus 50.27 54.23
KRH24697 Soybean nucleus, plastid 49.73 53.96
KRH29701 Soybean nucleus 49.46 53.67
CDY06390 Canola nucleus 48.38 53.59
AT3G57670.1 Thale cress nucleus 55.41 53.52
KRH71956 Soybean nucleus, plastid 53.51 53.37
KRH10191 Soybean nucleus, plastid 49.46 53.04
AT1G51220.1 Thale cress nucleus 47.84 52.52
Bra030450.1-P Field mustard nucleus 48.11 52.35
KRH23146 Soybean nucleus, plastid 49.46 52.29
CDY29624 Canola nucleus 47.84 52.06
KRH27491 Soybean nucleus, plastid 49.19 51.7
CDY35565 Canola nucleus 47.03 51.33
CDY22834 Canola nucleus, plastid 46.76 51.18
KRH20837 Soybean nucleus, plastid 49.19 50.98
CDY27556 Canola nucleus 49.19 50.84
KRH33045 Soybean nucleus, plastid 52.97 50.78
Bra018902.1-P Field mustard plastid 46.22 50.74
CDY57920 Canola nucleus 49.19 50.7
Bra023918.1-P Field mustard nucleus 49.19 50.7
CDY25224 Canola nucleus 46.22 50.59
Bra031239.1-P Field mustard nucleus 48.65 50.14
KRH43510 Soybean nucleus, plastid 46.76 50.0
KRH13927 Soybean nucleus, plastid 45.14 48.83
TraesCS5D01G270700.1 Wheat nucleus 53.78 48.54
TraesCS7D01G242600.1 Wheat nucleus 52.16 46.39
AT3G20880.1 Thale cress nucleus 48.38 43.45
Solyc03g059270.2.1 Tomato nucleus 39.46 42.69
TraesCS3D01G364800.1 Wheat nucleus 40.54 40.87
TraesCS5D01G184400.1 Wheat nucleus 37.03 38.59
TraesCS1D01G276200.1 Wheat nucleus, plastid 35.95 36.24
TraesCS3D01G054300.1 Wheat nucleus 15.41 21.19
TraesCS5D01G519100.1 Wheat nucleus 21.89 19.66
TraesCS6D01G188100.1 Wheat nucleus 19.19 19.24
TraesCS1D01G061200.1 Wheat nucleus 19.73 18.86
TraesCS3D01G375000.1 Wheat nucleus 19.46 13.85
Protein Annotations
EnsemblPlants:TraesCS7D01G397800.1EnsemblPlantsGene:TraesCS7D01G397800Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676GO:GO:0005488
InterPro:IPR013087InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR10593PANTHER:PTHR10593:SF61PFscan:PS50157
ScanProsite:PS00028SEG:segSMART:SM00355SUPFAM:SSF57667MapMan:15.5.15:
Description
No Description!
Coordinates
chr7D:-:512746566..512748992
Molecular Weight (calculated)
40449.0 Da
IEP (calculated)
7.668
GRAVY (calculated)
-0.751
Length
370 amino acids
Sequence
(BLAST)
001: MGDPYTNFLR GYSLRYSNAA ASSSSPFPSY TSCLHHPPPS SPPIREALPL LSLTPSSSTY HNPHQHNDQE DHKVITTASC SSQAEAADQA AGEVTVALHI
101: GLPSPGPSDA AASSGDHRQE AAAAGGVAAE ERSQQQQEEG QEEGEGEEED GNTMALGVGC ASLGIGRLTK GQYWIPTPSQ ILIGPTQFSC PVCYKTFNRY
201: NNMQMHMWGH GSQYRKGPES LRGTQPTAML RLPCYCCAAG CRNNVDHPRA RPLKDFRTLQ THYKRKHGIK PFMCRKCGKA FAVRGDWRTH EKNCGKLWYC
301: ACGSDFKHKR SLKDHIRAFG RGHAPCGIDC FDLDDDDRDP SSEVDHTVNT AAAATTTNSA GSDRRHWKAN
Best Arabidopsis Sequence Match ( AT3G57670.1 )
(BLAST)
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.