Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 72.35 | 75.23 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 62.65 | 68.49 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 64.12 | 67.49 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 61.47 | 65.52 |
| GSMUA_AchrUn_... | Banana | plastid | 62.65 | 65.14 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 60.88 | 64.29 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 55.29 | 62.67 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 61.18 | 61.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.29 | 59.59 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 62.94 | 59.28 |
| GSMUA_Achr11P... | Banana | nucleus | 38.24 | 58.04 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 52.35 | 57.42 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 61.47 | 57.26 |
| TraesCS7A01G404400.1 | Wheat | nucleus | 59.12 | 54.62 |
| TraesCS7B01G304000.1 | Wheat | nucleus | 59.12 | 54.32 |
| TraesCS7D01G397800.1 | Wheat | nucleus | 58.82 | 54.05 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 37.06 | 53.16 |
| Zm00001d036812_P001 | Maize | nucleus | 58.24 | 50.9 |
| EER88644 | Sorghum | nucleus, plastid | 59.71 | 50.25 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 40.88 | 49.82 |
| Zm00001d046774_P001 | Maize | nucleus | 57.94 | 49.5 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 38.82 | 46.98 |
| Os06t0612300-01 | Rice | endoplasmic reticulum, vacuole | 58.24 | 44.49 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 40.59 | 32.02 |
| GSMUA_Achr1P15330_001 | Banana | cytosol | 18.53 | 22.42 |
| GSMUA_Achr11P... | Banana | nucleus | 20.29 | 20.29 |
| GSMUA_Achr10P... | Banana | nucleus | 22.94 | 19.6 |
| GSMUA_Achr10P... | Banana | nucleus | 19.71 | 19.09 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 21.47 | 18.58 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 21.18 | 17.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P11870_001 | EnsemblPlants:GSMUA_Achr3T11870_001 | EnsemblPlantsGene:GSMUA_Achr3G11870_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF98 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002959C79 | UniProt:M0SDV4 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
ZOS6-05 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G11870_001]
Coordinates
chr3:-:8785913..8787624
Molecular Weight (calculated)
38653.4 Da
IEP (calculated)
8.308
GRAVY (calculated)
-0.836
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDPYTSCF KGYYDRCTFP STFPSSLPAT THSFYANFTN YATPHFQPSP PSPPLREALP LLSLSPTRHH RQQQRQEEGE DSSCSAFEEA EGDATVGYEK
101: KNMEEENVSV ALHIGLPSPS EADLISRISS TSLTRGQYWI PTLSQILIGP TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY
201: CCAPGCRNNI DHPRSRPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH IRAFGSGHAA YGIDCFDEDD
301: EPSSEIEQDC DHHQQQVQVQ QHTQSGNKKT VNGRKKTSLI
101: KNMEEENVSV ALHIGLPSPS EADLISRISS TSLTRGQYWI PTLSQILIGP TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY
201: CCAPGCRNNI DHPRSRPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCTCGSD FKHKRSLKDH IRAFGSGHAA YGIDCFDEDD
301: EPSSEIEQDC DHHQQQVQVQ QHTQSGNKKT VNGRKKTSLI
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.