Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P01410_001 | Banana | nucleus | 84.39 | 71.17 |
| PGSC0003DMT400096573 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 42.62 | 66.01 |
| VIT_01s0011g03100.t01 | Wine grape | nucleus | 62.45 | 53.82 |
| GSMUA_Achr11P... | Banana | nucleus | 48.95 | 51.79 |
| KRG92027 | Soybean | nucleus | 58.65 | 50.73 |
| KRH34760 | Soybean | nucleus | 58.23 | 50.55 |
| Solyc05g009770.1.1 | Tomato | nucleus | 58.23 | 48.25 |
| AT1G13290.1 | Thale cress | nucleus | 59.49 | 46.69 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 81.01 | 44.55 |
| KRH75477 | Soybean | nucleus | 61.6 | 43.98 |
| CDY19385 | Canola | nucleus | 56.12 | 43.75 |
| Bra019822.1-P | Field mustard | nucleus | 56.54 | 43.51 |
| CDX97995 | Canola | nucleus | 56.54 | 43.51 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 51.05 | 43.37 |
| KRH70598 | Soybean | nucleus | 60.76 | 43.11 |
| CDY26642 | Canola | nucleus | 52.74 | 42.23 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 50.63 | 40.0 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 53.16 | 39.13 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 51.05 | 38.91 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 52.74 | 38.7 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 51.9 | 38.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.74 | 38.23 |
| GSMUA_AchrUn_... | Banana | plastid | 51.48 | 37.31 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 53.16 | 37.06 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 53.16 | 36.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.9 | 35.76 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 51.48 | 33.8 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 43.88 | 33.55 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 51.48 | 33.42 |
| GSMUA_Achr1P15330_001 | Banana | cytosol | 23.63 | 19.93 |
| GSMUA_Achr11P... | Banana | nucleus | 25.74 | 17.94 |
| GSMUA_Achr10P... | Banana | nucleus | 27.0 | 16.08 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 26.58 | 16.03 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 26.58 | 15.25 |
| GSMUA_Achr10P... | Banana | nucleus | 22.36 | 15.1 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P21380_001 | EnsemblPlants:GSMUA_Achr6T21380_001 | EnsemblPlantsGene:GSMUA_Achr6G21380_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF52 |
| PFscan:PS50157 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000294BECE | UniProt:M0T8Y6 | MapMan:15.5.15 |
Description
ZOS9-04 - C2H2 zinc finger protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G21380_001]
Coordinates
chr6:-:17253813..17254748
Molecular Weight (calculated)
26381.1 Da
IEP (calculated)
8.817
GRAVY (calculated)
-0.576
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFNTNDQEE DNTVLLLSLW PPGSQSSPAS SSCSSSTSTF VASNTAATTA AGLNLVPSSY WIPSPAEILV SATQFSCTVS NKTFNRFNNM QMHMWGHGSQ
101: YRRGSESPRG IPRQLPSPCL LKLPCYCCAE GCKNNIEHPR SRPLKDFRTL QTHYKRKHGV RPFACRRCGK AFAVRGDWRT HEKNCGKLWF CICGSDFKHK
201: RSLKDHVRSF GSGHAPHIAE TMSIDEEVGV IEGKDGD
101: YRRGSESPRG IPRQLPSPCL LKLPCYCCAE GCKNNIEHPR SRPLKDFRTL QTHYKRKHGV RPFACRRCGK AFAVRGDWRT HEKNCGKLWF CICGSDFKHK
201: RSLKDHVRSF GSGHAPHIAE TMSIDEEVGV IEGKDGD
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.