Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85186 | Sorghum | nucleus | 47.01 | 45.33 |
| TraesCS6D01G188100.1 | Wheat | nucleus | 47.01 | 44.72 |
| KRG97571 | Soybean | nucleus, plastid | 43.02 | 44.67 |
| TraesCS6A01G201100.1 | Wheat | nucleus | 46.72 | 44.44 |
| PGSC0003DMT400008898 | Potato | extracellular, nucleus | 46.44 | 44.29 |
| TraesCS6B01G227100.1 | Wheat | nucleus | 46.72 | 44.2 |
| Os02t0572900-01 | Rice | cytosol, extracellular, nucleus | 47.86 | 43.75 |
| KRH59322 | Soybean | nucleus | 40.74 | 43.73 |
| Solyc04g056320.1.1 | Tomato | nucleus | 46.15 | 43.43 |
| KRH43171 | Soybean | nucleus, plastid | 39.03 | 43.08 |
| KRH31302 | Soybean | nucleus, plastid | 43.3 | 41.76 |
| VIT_07s0141g00020.t01 | Wine grape | vacuole | 49.29 | 41.19 |
| Zm00001d016911_P001 | Maize | nucleus | 48.72 | 40.91 |
| GSMUA_Achr1P15330_001 | Banana | cytosol | 31.34 | 39.15 |
| GSMUA_Achr11P... | Banana | nucleus | 32.48 | 33.53 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 31.05 | 27.74 |
| GSMUA_Achr10P... | Banana | nucleus | 31.34 | 27.64 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 30.2 | 25.67 |
| GSMUA_Achr11P... | Banana | nucleus | 15.67 | 24.55 |
| GSMUA_Achr6P21380_001 | Banana | nucleus | 15.1 | 22.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.37 | 20.8 |
| GSMUA_Achr8P25650_001 | Banana | nucleus, plastid | 17.38 | 20.33 |
| GSMUA_Achr3P03850_001 | Banana | plastid | 18.52 | 20.12 |
| GSMUA_Achr9P12600_001 | Banana | nucleus | 17.66 | 19.94 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 15.67 | 19.71 |
| GSMUA_Achr3P11870_001 | Banana | nucleus | 19.09 | 19.71 |
| GSMUA_Achr6P01410_001 | Banana | nucleus | 15.67 | 19.57 |
| GSMUA_AchrUn_... | Banana | plastid | 18.23 | 19.57 |
| GSMUA_Achr4P01560_001 | Banana | nucleus | 17.95 | 19.57 |
| GSMUA_Achr6P03470_001 | Banana | nucleus | 17.38 | 19.12 |
| GSMUA_Achr3P11050_001 | Banana | cytosol, nucleus, plastid | 18.23 | 18.77 |
| GSMUA_Achr9P22340_001 | Banana | nucleus | 19.09 | 18.36 |
| GSMUA_Achr1P16530_001 | Banana | nucleus | 18.52 | 18.01 |
| GSMUA_Achr4P06350_001 | Banana | nucleus | 15.67 | 17.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.09 | 17.44 |
| GSMUA_Achr5P09960_001 | Banana | endoplasmic reticulum, nucleus, plastid | 16.24 | 13.23 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P30400_001 | EnsemblPlants:GSMUA_Achr10T30400_001 | EnsemblPlantsGene:GSMUA_Achr10G30400_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF71 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000296054C |
| UniProt:M0RMR4 | MapMan:15.5.15 | : | : | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G30400_001]
Coordinates
chr10:-:32616270..32620754
Molecular Weight (calculated)
38221.8 Da
IEP (calculated)
8.741
GRAVY (calculated)
-0.389
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGSGGRNPG QEPFLPLGGG GGDPGGAPLA SHDPFLPLLN LSALGQKMDS LRRFLSDAID SRTVIGDDQL QMVSSHIASA VQGIILNGAA LLASSQPLNP
101: SPSFAAAGGP TSRDAPPTSD PAAAIGEEDD IVEIDAAELL AEHVHLCEIC GKGFKRDANL RMHMRAHGDR FKTLEALSKP DREVRPSDGG EAVPGRRVRF
201: SCPYPGCNRN RAHKKFRPLK SVACVKNHFK RSHCPKMYSC HRCNKKNFSV VADLRSHLKH CGMTRWRCSC GTSFSRKDKL FGHITLFEGH MPAVEVGAEE
301: EVKKKGVILE WKDALASLCE IHQRCFVISG QRQGDRTHFG AFSRIFHLDL S
101: SPSFAAAGGP TSRDAPPTSD PAAAIGEEDD IVEIDAAELL AEHVHLCEIC GKGFKRDANL RMHMRAHGDR FKTLEALSKP DREVRPSDGG EAVPGRRVRF
201: SCPYPGCNRN RAHKKFRPLK SVACVKNHFK RSHCPKMYSC HRCNKKNFSV VADLRSHLKH CGMTRWRCSC GTSFSRKDKL FGHITLFEGH MPAVEVGAEE
301: EVKKKGVILE WKDALASLCE IHQRCFVISG QRQGDRTHFG AFSRIFHLDL S
001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
Arabidopsis Description
STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.