Factsheet for GSMUA_Achr10P15970_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P01170_001	Banana	nucleus	51.51	52.16
GSMUA_Achr6P18840_001	Banana	nucleus	50.0	48.18
GSMUA_Achr1P15330_001	Banana	cytosol	26.63	37.72
GSMUA_Achr11P...	Banana	nucleus	29.9	35.0
GSMUA_Achr10P...	Banana	nucleus	27.64	31.34
GSMUA_Achr11P...	Banana	nucleus	16.58	29.46
GSMUA_Achr6P21380_001	Banana	nucleus	16.08	27.0
GSMUA_Achr5P26210_001	Banana	nucleus	17.84	25.45
GSMUA_Achr8P25650_001	Banana	nucleus, plastid	18.09	24.0
GSMUA_Achr3P03850_001	Banana	plastid	19.35	23.84
GSMUA_Achr9P12600_001	Banana	nucleus	18.34	23.47
GSMUA_AchrUn_...	Banana	nucleus	19.1	23.24
GSMUA_Achr6P01410_001	Banana	nucleus	16.33	23.13
GSMUA_Achr3P11870_001	Banana	nucleus	19.6	22.94
GSMUA_Achr6P03470_001	Banana	nucleus	18.34	22.88
GSMUA_Achr3P11050_001	Banana	cytosol, nucleus, plastid	19.6	22.87
GSMUA_Achr4P01560_001	Banana	nucleus	18.34	22.67
GSMUA_AchrUn_...	Banana	plastid	18.34	22.32
GSMUA_AchrUn_...	Banana	nucleus	18.59	21.51
GSMUA_Achr9P22340_001	Banana	nucleus	18.84	20.55
GSMUA_Achr1P16530_001	Banana	nucleus	18.59	20.5
GSMUA_Achr4P06350_001	Banana	nucleus	15.58	20.0
GSMUA_Achr5P09960_001	Banana	endoplasmic reticulum, nucleus, plastid	16.83	15.55

Protein Annotations

EnsemblPlants:GSMUA_Achr10P15970_001	EnsemblPlants:GSMUA_Achr10T15970_001	EnsemblPlantsGene:GSMUA_Achr10G15970_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593	PANTHER:PTHR10593:SF71
PFscan:PS50157	ScanProsite:PS00028	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000294C4D0	UniProt:M0RIM2
MapMan:15.5.15	:	:	:	:	:

Description

Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G15970_001]

Coordinates

chr10:+:23683919..23685639

Molecular Weight (calculated)

44518.3 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.614

Length

398 amino acids

Sequence
(BLAST)

001: MSSESRNLNQ NQRATEFDAR ETEQSLPKFS SHLDNSFHQS NQAQRVAMNW DPRAVLNSLD ILGQKIHQIQ DIVRSTLSDE RQLSIQPNEF AAQQQLINTD
101: LTCTIIELIS TAGTLLPLIK NALASGINSS GQIDNDVKDN EDGVSGENLP LGSYEVLQLE KEEILAPHTH FCAICGKGFK RDANLRMHMR GHGDEYKSPS
201: ALAKPTKEGS SEPVPIKRYS CPFIGCKRNK EHKNFQPLKT ILCVKNHYKR SHCDKSYTCR RCNSKKFSVM ADLKTHEKHC GSNKWLCSCG TTFSRKDKLF
301: GHIALFQGHT PALSMDEVKS QGMSVQGQSD EVMAKEEDID YLISGNVIED TNFSGLNGTD NDLGYFSSMN FDSFTFGGID GLQQPSFDTS ESLFSFHK

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.