Factsheet for Os01t0871200-03

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012260_P001	Maize	nucleus	79.89	80.35
TraesCS3B01G414500.1	Wheat	nucleus	79.31	79.62
TraesCS3D01G375000.1	Wheat	nucleus	79.12	79.42
KXG33778	Sorghum	nucleus	78.74	79.19
TraesCS3A01G381900.1	Wheat	nucleus	78.54	79.15
Zm00001d042686_P001	Maize	nucleus	76.63	77.22
GSMUA_Achr5P01170_001	Banana	nucleus	45.98	61.07
Solyc06g065440.1.1	Tomato	cytosol	39.66	58.97
GSMUA_Achr6P18840_001	Banana	nucleus	44.64	56.42
PGSC0003DMT400067092	Potato	nucleus	44.64	53.81
CDY03148	Canola	nucleus	42.72	51.74
VIT_18s0072g00840.t01	Wine grape	nucleus	52.11	51.61
CDY12041	Canola	nucleus	40.42	51.59
Bra040971.1-P	Field mustard	nucleus	41.57	50.94
Solyc11g017140.1.1	Tomato	nucleus	46.36	49.9
KRH34957	Soybean	nucleus, plastid	48.08	49.51
KRG91822	Soybean	nucleus, plastid	47.89	49.12
CDY46467	Canola	nucleus	45.59	48.77
KRH08551	Soybean	nucleus, plastid	48.47	48.56
PGSC0003DMT400023881	Potato	nucleus	47.51	48.34
Bra036750.1-P	Field mustard	nucleus	45.4	48.27
CDX91774	Canola	nucleus	45.79	48.19
AT1G34370.1	Thale cress	nucleus	45.98	48.1
Os03t0838800-00	Rice	nucleus	32.57	46.32
Os12t0170400-01	Rice	nucleus	40.42	45.38
Os09t0485600-01	Rice	cytosol, mitochondrion, nucleus	10.34	35.06
Os09t0282100-00	Rice	cytosol, mitochondrion, nucleus	9.2	33.33
Os08t0562300-01	Rice	nucleus	23.18	31.43
Os02t0572900-01	Rice	cytosol, extracellular, nucleus	22.99	31.25
Os04t0165200-01	Rice	nucleus	20.69	29.11
Os02t0196100-01	Rice	cytosol, extracellular, nucleus	12.26	29.09
Os01t0859100-01	Rice	nucleus, plastid	13.79	19.15
Os05t0444200-01	Rice	plastid	14.18	19.02
Os09t0307400-00	Rice	nucleus	14.18	18.78
Os08t0504000-01	Rice	nucleus	14.75	17.58
Os06t0612300-01	Rice	endoplasmic reticulum, vacuole	13.6	15.96
Os09t0282300-00	Rice	nucleus	3.45	10.47

Protein Annotations

MapMan:15.5.15	EntrezGene:4324940	EMBL:AK072211	EMBL:AK100840	ProteinID:BAB64114.1	ProteinID:BAB86538.1
ProteinID:BAF06849.1	ProteinID:BAS75445.1	ncoils:Coil	ProteinID:EEE55740.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0010044	GO:GO:0010447	GO:GO:0046872	InterPro:IPR013087
EnsemblPlantsGene:Os01g0871200	EnsemblPlants:Os01t0871200-03	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF41
UniProt:Q943I6	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00000A1DA8	RefSeq:XP_015641300.1	RefSeq:XP_015641307.1
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	:	:	:	:

Description

basic helix-loop-helix protein 033, zinc finger proteinZinc finger, C2H2-type domain containing protein. (Os01t0871200-01);Zinc finger, C2H2-type domain containing protein. (Os01t0871200-02);Zinc finger, C2H2-type domain containing protein. (Os01t0871200-03);Zinc finger, C2H2-type domain containing protein. (Os01t0871200-04)

Coordinates

chr1:+:37774063..37778545

Molecular Weight (calculated)

57150.2 Da

IEP (calculated)

5.745

GRAVY (calculated)

-0.588

Length

522 amino acids

Sequence
(BLAST)

001: MDSGLGRSSE TSLKALPSMA SNATRNTDPD QQGVRFSSMD QPPCFARPGQ SFPAFPPLFG VQSSSLYLPD DIEAKIGNQF ESNPSPNNPT MDWDPQAMLS
101: NLSFLEQKIK QVKDIVQSMS NRESQVAGGS SEAQAKQQLV TADLTCIIIQ LISTAGSLLP SMKNPISSNP ALRHLSNTLC APMILGTNCN LRPSANDEAT
201: IPDISKTHDY EELMNSLNTT QAESDEMMNC QNPCGGEGSE PIPMEDHDVK ESDDGGEREN LPPGSYVVLQ LEKEEILAPH THFCLICGKG FKRDANLRMH
301: MRGHGDEYKT AAALAKPSKD SSLESAPVTR YSCPYVGCKR NKEHKKFQPL KTILCVKNHY KRSHCDKSYT CSRCNTKKFS VIADLKTHEK HCGRDKWLCS
401: CGTTFSRKDK LFGHVALFQG HTPALPMDDI KVTGASEQPQ GSEAMNTMVG SAGYNFPGSS SDDIPNLDMK MADDPRYFSP LSFDPCFGGL DDFTRPGFDI
501: SENPFSFLPS GSCSFGQQNG DS

Best Arabidopsis Sequence Match ( AT1G34370.2 )
(BLAST)

001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL

Arabidopsis Description

STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.