Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023881 | Potato | nucleus | 96.29 | 91.03 |
| Solyc06g065440.1.1 | Tomato | cytosol | 53.61 | 74.07 |
| VIT_18s0072g00840.t01 | Wine grape | nucleus | 65.98 | 60.72 |
| CDY12041 | Canola | nucleus | 47.63 | 56.48 |
| CDY03148 | Canola | nucleus | 50.1 | 56.38 |
| KRH34957 | Soybean | nucleus, plastid | 58.56 | 56.02 |
| KRG91822 | Soybean | nucleus, plastid | 58.76 | 55.99 |
| Bra040971.1-P | Field mustard | nucleus | 49.07 | 55.87 |
| GSMUA_Achr5P01170_001 | Banana | nucleus | 44.33 | 54.71 |
| CDY46467 | Canola | nucleus | 54.02 | 53.69 |
| KRH08551 | Soybean | nucleus, plastid | 57.32 | 53.36 |
| Bra036750.1-P | Field mustard | nucleus | 53.81 | 53.16 |
| AT1G34370.1 | Thale cress | nucleus | 54.64 | 53.11 |
| CDX91774 | Canola | nucleus | 54.23 | 53.02 |
| GSMUA_Achr6P18840_001 | Banana | nucleus | 42.27 | 49.64 |
| KXG33778 | Sorghum | nucleus | 50.93 | 47.59 |
| Zm00001d012260_P001 | Maize | nucleus | 50.52 | 47.21 |
| Zm00001d042686_P001 | Maize | nucleus | 49.9 | 46.72 |
| TraesCS3A01G381900.1 | Wheat | nucleus | 49.69 | 46.53 |
| Os01t0871200-03 | Rice | nucleus | 49.9 | 46.36 |
| TraesCS3B01G414500.1 | Wheat | nucleus | 49.48 | 46.15 |
| TraesCS3D01G375000.1 | Wheat | nucleus | 49.48 | 46.15 |
| Solyc04g056320.1.1 | Tomato | nucleus | 28.87 | 37.53 |
| Solyc11g066420.1.1 | Tomato | nucleus, plastid | 27.01 | 34.11 |
| Solyc11g062060.1.1 | Tomato | nucleus | 14.23 | 26.44 |
| Solyc04g074320.1.1 | Tomato | nucleus | 13.81 | 24.54 |
| Solyc01g087050.2.1 | Tomato | nucleus | 14.85 | 24.16 |
| Solyc05g009770.1.1 | Tomato | nucleus | 13.4 | 22.73 |
| Solyc03g059270.2.1 | Tomato | nucleus | 12.78 | 18.13 |
| Solyc06g074360.2.1 | Tomato | nucleus | 6.39 | 14.69 |
Protein Annotations
| EnsemblPlants:Solyc11g017140.1.1 | EnsemblPlantsGene:Solyc11g017140.1 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF41 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000276A75D | UniProt:K4D6L7 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:7925834..7927291
Molecular Weight (calculated)
54310.6 Da
IEP (calculated)
6.572
GRAVY (calculated)
-0.728
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDNHSFTN LNLHEQKWEG SSYLDQEIRI EQQFTGFAKP KHTSEMDQQG NQNHDTTRIH DWDPRALLNN LSFLEQKIHQ LQELVHLIVG RRGQDEVQGN
101: DLIVQQQQLI TADLTSIIVQ LISTAGSLLP TMKYTLSSAI PAASQLGQVG GVTVPSTAGT SAGGLTCNDG VAKLEDQSNH IDQLRDCGIE HNHAADEHEL
201: KDEDEAEEEE NLPPGSYEIL QLEKEEILAP HTHFCTICGK GFKRDANLRM HMRGHGDEYK TPAALAKPHK EPSSEPTLIK RYSCPYVGCK RNKEHKKFQP
301: LKTILCVKNH YKRTHCEKAY TCSRCNIKKF SVIADLKTHE KHCGKDKWLC SCGTTFSRKD KLFGHISLFQ GHTPAVSPDE TKGSAGTSDR GQTGEVTMKA
401: RQENYKVNAS LGNEFQNPGV VKECPYNPSS YFSPLNFDTS NLNGFQEFPR PPFDESDSSF SFLLSGSCEY PPHKAAKFMS SSEME
101: DLIVQQQQLI TADLTSIIVQ LISTAGSLLP TMKYTLSSAI PAASQLGQVG GVTVPSTAGT SAGGLTCNDG VAKLEDQSNH IDQLRDCGIE HNHAADEHEL
201: KDEDEAEEEE NLPPGSYEIL QLEKEEILAP HTHFCTICGK GFKRDANLRM HMRGHGDEYK TPAALAKPHK EPSSEPTLIK RYSCPYVGCK RNKEHKKFQP
301: LKTILCVKNH YKRTHCEKAY TCSRCNIKKF SVIADLKTHE KHCGKDKWLC SCGTTFSRKD KLFGHISLFQ GHTPAVSPDE TKGSAGTSDR GQTGEVTMKA
401: RQENYKVNAS LGNEFQNPGV VKECPYNPSS YFSPLNFDTS NLNGFQEFPR PPFDESDSSF SFLLSGSCEY PPHKAAKFMS SSEME
001: METEDDLCNT NWGSSSSKSR EPGSSDCGNS TFAGFTSQQK WEDASILDYE MGVEPGLQES IQANVDFLQG VRAQAWDPRT MLSNLSFMEQ KIHQLQDLVH
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
101: LLVGRGGQLQ GRQDELAAQQ QQLITTDLTS IIIQLISTAG SLLPSVKHNM STAPGPFTGQ PGSAVFPYVR EANNVASQSQ NNNNCGAREF DLPKPVLVDE
201: REGHVVEEHE MKDEDDVEEG ENLPPGSYEI LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTAAALAKPN KESVPGSEPM LIKRYSCPFL
301: GCKRNKEHKK FQPLKTILCV KNHYKRTHCD KSFTCSRCHT KKFSVIADLK THEKHCGKNK WLCSCGTTFS RKDKLFGHIA LFQGHTPAIP LEETKPSAST
401: STQRGSSEGG NNNQGMVGFN LGSASNANQE TTQPGMTDGR ICFEESFSPM NFDTCNFGGF HEFPRLMFDD SESSFQMLIA NACGFSPRNV GESVSDTSL
Arabidopsis Description
STOP1Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.