Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G172600.1 | Wheat | mitochondrion | 36.51 | 83.94 |
| Os09t0282100-00 | Rice | cytosol, mitochondrion, nucleus | 36.51 | 79.86 |
| TraesCS5A01G175400.1 | Wheat | nucleus | 66.67 | 68.18 |
| TraesCS5D01G179700.1 | Wheat | nucleus | 66.03 | 67.53 |
| Os09t0282300-00 | Rice | nucleus | 24.76 | 45.35 |
| EER88644 | Sorghum | nucleus, plastid | 52.7 | 41.09 |
| EES15412 | Sorghum | nucleus | 49.84 | 36.68 |
| EER96965 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 50.48 | 35.26 |
| EER96535 | Sorghum | nucleus | 41.27 | 35.14 |
| EES18308 | Sorghum | plastid | 42.86 | 33.5 |
| EES03920 | Sorghum | plastid | 40.95 | 32.01 |
| KXG37177 | Sorghum | nucleus | 21.9 | 17.42 |
| OQU85186 | Sorghum | nucleus | 19.68 | 17.03 |
| OQU80698 | Sorghum | nucleus | 20.63 | 15.29 |
| KXG33778 | Sorghum | nucleus | 21.27 | 12.91 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:8062036 | UniProt:C5X870 | EnsemblPlants:EER98623 | ProteinID:EER98623 | ProteinID:EER98623.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009813 | InterPro:IPR013087 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF67 | EnsemblPlantsGene:SORBI_3002G153900 | SUPFAM:SSF57667 |
| UniParc:UPI0001A842FD | RefSeq:XP_002462102.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:46356015..46359637
Molecular Weight (calculated)
35012.7 Da
IEP (calculated)
8.903
GRAVY (calculated)
-0.659
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSSYTFLR PHIAGPLLFQ RSLVVSPPPV PPPPVTKEAL PLLSLLPSSS HDYNQHGDNN DKADQPRNKN NEEEAMEDTE TIKLRIGPPS PNCDSPLDLA
101: TVVAGAGDSK AAEEGEEELG SQAGGTATGD DGCSEYFTIG EKKLTNGKYW IPTAAQIMFG PMLFACPVCC KTFSRYNNLQ MHMWGHGSQY RRGPDSLRGT
201: QPAAMLRLPC FCCAPGCRNH VDHPRARPLK DFRTLQTHYR RRHCARPFLC RRCGKALAVR GDWRTHEKNC GRRWRCACGS DFKHKRSLKD HVRAFGRGHV
301: EDHPAVIVGQ TKPTV
101: TVVAGAGDSK AAEEGEEELG SQAGGTATGD DGCSEYFTIG EKKLTNGKYW IPTAAQIMFG PMLFACPVCC KTFSRYNNLQ MHMWGHGSQY RRGPDSLRGT
201: QPAAMLRLPC FCCAPGCRNH VDHPRARPLK DFRTLQTHYR RRHCARPFLC RRCGKALAVR GDWRTHEKNC GRRWRCACGS DFKHKRSLKD HVRAFGRGHV
301: EDHPAVIVGQ TKPTV
001: MTDPYSNFFT DWFKSNPFHH YPNSSTNPSP HPLPPVTPPS SFFFFPQSGD LRRPPPPPTP PPSPPLREAL PLLSLSPANK QQDHHHNHDH LIQEPPSTSM
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
101: DVDYDHHHQD DHHNLDDDDH DVTVALHIGL PSPSAQEMAS LLMMSSSSSS SRTTHHHEDM NHKKDLDHEY SHGAVGGGED DDEDSVGGDG GCRISRLNKG
201: QYWIPTPSQI LIGPTQFSCP VCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTGMLR LPCYCCAPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP
301: FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHGAYGIDGF DEEDEPASEV EQLDNDHESM QSK
Arabidopsis Description
WIP2WIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VLW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.