Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06308 | Canola | nucleus | 95.85 | 95.85 |
| KRH25207 | Soybean | nucleus | 34.72 | 79.05 |
| CDX95075 | Canola | nucleus | 60.53 | 60.35 |
| CDX93575 | Canola | nucleus | 59.94 | 59.94 |
| AT1G08290.1 | Thale cress | nucleus | 58.46 | 58.46 |
| KRH26622 | Soybean | nucleus | 54.3 | 57.01 |
| KRH22690 | Soybean | nucleus | 53.41 | 56.43 |
| KRH30442 | Soybean | nucleus | 53.71 | 54.85 |
| CDY57608 | Canola | nucleus | 38.28 | 53.75 |
| VIT_06s0080g00270.t01 | Wine grape | plastid | 54.9 | 53.31 |
| CDX67704 | Canola | nucleus | 38.28 | 52.44 |
| GSMUA_Achr5P26210_001 | Banana | nucleus | 42.73 | 51.61 |
| PGSC0003DMT400018308 | Potato | nucleus, plastid | 49.26 | 50.92 |
| CDY03134 | Canola | nucleus | 39.76 | 46.69 |
| CDY12025 | Canola | nucleus | 39.76 | 46.69 |
| CDY19385 | Canola | nucleus | 40.06 | 44.41 |
| CDX97995 | Canola | nucleus | 40.06 | 43.83 |
| CDY29624 | Canola | nucleus | 42.43 | 42.06 |
| CDY26642 | Canola | nucleus | 36.8 | 41.89 |
| CDY35565 | Canola | nucleus | 42.14 | 41.89 |
| CDY22834 | Canola | nucleus, plastid | 41.84 | 41.72 |
| CDY25224 | Canola | nucleus | 41.54 | 41.42 |
| CDY06390 | Canola | nucleus | 40.06 | 40.42 |
| CDY27556 | Canola | nucleus | 42.73 | 40.22 |
| Os01t0859100-01 | Rice | nucleus, plastid | 44.81 | 40.16 |
| CDY57920 | Canola | nucleus | 42.73 | 40.11 |
| CDX88959 | Canola | nucleus | 42.43 | 39.29 |
| CDX72006 | Canola | nucleus | 42.73 | 38.61 |
| CDY06083 | Canola | nucleus | 42.43 | 38.24 |
| TraesCS3D01G364800.1 | Wheat | nucleus | 41.54 | 38.15 |
| TraesCS3B01G404000.1 | Wheat | nucleus | 41.84 | 37.9 |
| TraesCS1B01G285900.1 | Wheat | nucleus, plastid | 40.65 | 37.03 |
| Os05t0444200-01 | Rice | plastid | 42.73 | 37.02 |
| TraesCS1D01G276200.1 | Wheat | nucleus, plastid | 39.76 | 36.51 |
| EES03920 | Sorghum | plastid | 43.32 | 36.23 |
| EES18308 | Sorghum | plastid | 43.32 | 36.23 |
| Solyc06g074360.2.1 | Tomato | nucleus | 22.55 | 36.02 |
| Zm00001d038297_P001 | Maize | nucleus | 41.54 | 35.71 |
| Zm00001d042781_P001 | Maize | nucleus | 42.43 | 35.4 |
| TraesCS1A01G276800.1 | Wheat | nucleus, plastid | 39.47 | 35.09 |
| Zm00001d010131_P001 | Maize | nucleus, plastid | 40.95 | 35.03 |
| TraesCS3A01G371700.1 | Wheat | cytosol, plastid | 41.84 | 33.02 |
| KRH25208 | Soybean | nucleus, plastid | 16.62 | 32.0 |
| CDY09179 | Canola | nucleus | 18.1 | 18.83 |
| CDY26965 | Canola | nucleus | 19.29 | 17.76 |
| CDY69109 | Canola | nucleus | 19.29 | 17.47 |
| CDY09178 | Canola | nucleus | 18.99 | 17.34 |
| CDY26966 | Canola | nucleus | 18.4 | 16.49 |
| CDY12041 | Canola | nucleus | 19.88 | 16.38 |
| CDY31715 | Canola | nucleus | 18.1 | 16.22 |
| CDX98183 | Canola | nucleus | 18.1 | 16.22 |
| CDX74505 | Canola | nucleus | 18.1 | 16.22 |
| CDY03148 | Canola | nucleus | 20.18 | 15.78 |
| CDY46467 | Canola | nucleus | 21.07 | 14.55 |
| CDX91774 | Canola | nucleus | 21.07 | 14.31 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078G8A7 | UniProt:A0A078G8A7 | EnsemblPlants:CDY22690 | ProteinID:CDY22690 |
| ProteinID:CDY22690.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00019362001 | InterPro:IPR013087 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF58 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0004EC833A | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
BnaC08g43240DBnaC08g43240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8A7]
Coordinates
chrLK032134:+:487489..491170
Molecular Weight (calculated)
38271.5 Da
IEP (calculated)
8.105
GRAVY (calculated)
-0.721
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLDERGLGF ESSSFLAWLR ASSNSSSPSG LFRMKTQDVV SRSYHQSQMK LERSLFLYQP QAPLSTSTIQ CLPLLNKLME DESQASDDIK EEMDDDVVTL
101: RIGLPTYHRG SSEEDDSDTT SDHHQEKSIK REMIEDGGVM MKKMRTMKFQ QEMIDSDMGV CGKRFWIPSP AQIHVGPMQF ACSICSKTFT RYNNMQMHMW
201: GHGSEFRKGA DSLKGTTQPA AILRLPCYCC AEGCKNNINH PRAKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIK SFGHGHSPHP SLSFDGFEED VECVTTE
101: RIGLPTYHRG SSEEDDSDTT SDHHQEKSIK REMIEDGGVM MKKMRTMKFQ QEMIDSDMGV CGKRFWIPSP AQIHVGPMQF ACSICSKTFT RYNNMQMHMW
201: GHGSEFRKGA DSLKGTTQPA AILRLPCYCC AEGCKNNINH PRAKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIK SFGHGHSPHP SLSFDGFEED VECVTTE
001: MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
101: TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW
201: GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK
301: HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
Arabidopsis Description
WIP3Zinc finger protein WIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.