CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95451
KRH00705
KRH11296
KRH11936
KRH20965
KRH31957
KRH33045
KRH36969
KRH40491
KRH48177
KRH50948
KRH65100
KRH67127
KRH71497
KRH71956

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10470.1	KRH11936	AT2G18790.1	11691995
AT1G10470.1	KRH36969	AT2G18790.1	11691995
AT1G10470.1	KRH00705	AT2G45820.1	9771897
AT1G10470.1	KRH40491	AT2G45820.1	9771897
AT1G10470.1	KRH48177	AT2G45820.1	9771897
AT1G10470.1	KRH65100	AT2G45820.1	9771897
AT1G10470.1	KRH11296	AT3G21510.1	10930573
AT1G10470.1	KRH20965	AT3G21510.1	10930573
AT1G10470.1	KRH50948	AT3G21510.1	10930573
AT1G10470.1	KRH11296	AT3G21510.1	16965536
AT1G10470.1	KRH20965	AT3G21510.1	16965536
AT1G10470.1	KRH50948	AT3G21510.1	16965536
AT1G10470.1	KRG95451	AT3G29350.1	16965536
AT1G10470.1	KRH31957	AT3G29350.1	16965536
AT1G10470.1	KRH67127	AT3G29350.1	16965536
AT1G10470.1	KRH71497	AT3G29350.1	16965536
AT1G10470.1	KRH33045	AT3G57670.1	18642946
AT1G10470.1	KRH71956	AT3G57670.1	18642946
AT1G10470.1	KRH00705	AT3G61260.1	9771897
AT1G10470.1	KRH40491	AT3G61260.1	9771897
AT1G10470.1	KRH48177	AT3G61260.1	9771897
AT1G10470.1	KRH65100	AT3G61260.1	9771897

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74701	Soybean	nucleus	94.17	92.62
KRH45761	Soybean	nucleus	65.0	69.96
KRG99225	Soybean	nucleus	64.58	69.82
VIT_01s0026g00940.t01	Wine grape	nucleus	61.25	66.52
KRH53721	Soybean	cytosol	32.5	57.35
KRH03376	Soybean	nucleus	49.17	57.0
Bra027829.1-P	Field mustard	nucleus	53.33	56.64
CDY45155	Canola	nucleus	52.92	55.7
KRH57009	Soybean	nucleus	48.75	55.45
PGSC0003DMT400058306	Potato	nucleus	57.08	55.24
CDY30913	Canola	nucleus	54.58	55.04
KRH64213	Soybean	cytosol	33.33	54.79
Solyc05g006420.2.1	Tomato	nucleus	56.25	53.78
CDY20630	Canola	nucleus	55.0	53.44
KRH63457	Soybean	cytosol	45.42	53.43
Bra018439.1-P	Field mustard	nucleus	55.42	52.99
CDY20948	Canola	nucleus	55.83	52.96
KRH54462	Soybean	cytosol	44.17	51.96
CDY37975	Canola	nucleus	54.17	51.38
CDX93424	Canola	nucleus	53.75	50.99
AT1G10470.1	Thale cress	nucleus	55.0	50.97
Bra019932.1-P	Field mustard	nucleus	53.33	50.59
CDY66046	Canola	nucleus	53.33	50.59
KRH13391	Soybean	nucleus	37.5	50.28
Bra036963.1-P	Field mustard	nucleus	54.58	50.19
Bra031714.1-P	Field mustard	nucleus	54.58	50.19
CDY07801	Canola	nucleus	55.42	50.19
KRH30056	Soybean	nucleus	38.75	49.73
KRH20737	Soybean	nucleus	37.08	49.72
CDY34890	Canola	nucleus	53.75	49.62
KRH62857	Soybean	nucleus	36.25	47.03
AT1G59940.2	Thale cress	golgi	50.83	37.77
KRH66808	Soybean	nucleus	37.92	36.69
KRH18706	Soybean	nucleus	32.5	36.62
KRG95133	Soybean	nucleus	37.5	36.59
KRH53261	Soybean	nucleus	34.58	35.78
KRH64643	Soybean	nucleus	35.0	35.74

Protein Annotations

EntrezGene:100787696	MapMan:11.4.2.5	Gene3D:3.40.50.2300	EMBL:ACUP02000709	InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_02G027400
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	UniProt:I1JBW0	InterPro:IPR001789	EnsemblPlants:KRH69443	ProteinID:KRH69443
ProteinID:KRH69443.1	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF17	SMART:SM00448
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002337A6E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:2467543..2469109

Molecular Weight (calculated)

26532.5 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.372

Length

240 amino acids

Sequence
(BLAST)

001: MDTDSFVSFD HVSPEDSHEV HVLAVDDSLV DRKVIERLLK ISACKVTAVD SGIRALQFLG LDEQRRTSES DGFVPDLKVD LIITDYCMPE MTGYELLKKI
101: KESTMFREIP VVIMSSENIL PRIDRCLEEG AEDFIVKPVK LSDVKRLKGY MTPKEVIKMR SQEDRRSDGY VNGGDGGVLE INNKRKLEEQ DTSDVSLSPP
201: STSTLSSSPS VSSPSPSSSP TSSASVLASP IRRLKMTSTD

Best Arabidopsis Sequence Match ( AT1G59940.2 )
(BLAST)

001: MNFEFIFLYL FRLVRYFLLP PSQKRKKGTY RFVSLIVTWN KKIFCKRNEV ENDPPIKRFD IEEYNNENIK QSREELVAIS LFYLFISYSF LTMAKDGGVS
101: CLRRSEMIGI GIGELESPPL DSDQVHVLAV DDSLVDRIVI ERLLRITSCK VTAVDSGWRA LEFLGLDDDK AAVEFDRLKV DLIITDYCMP GMTGYELLKK
201: IKESTSFKEV PVVIMSSENV MTRIDRCLEE GAEDFLLKPV KLADVKRLRS YLTRDVKVAA EGNKRKLTTP PPPPPLSATS SMESSDSTVE SPLSMVDDED
301: SLTMSPESAT SLVDSPMRSP GLA

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.