Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95133 | Soybean | nucleus | 90.32 | 91.06 |
| CDY65526 | Canola | cytosol | 48.39 | 75.95 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 65.32 | 74.31 |
| KRH13391 | Soybean | nucleus | 49.19 | 68.16 |
| GSMUA_Achr11P... | Banana | nucleus | 50.81 | 68.11 |
| PGSC0003DMT400076758 | Potato | nucleus | 61.29 | 67.26 |
| KRH20737 | Soybean | nucleus | 48.39 | 67.04 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 50.81 | 66.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.82 | 65.5 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 50.81 | 65.28 |
| KRH30056 | Soybean | nucleus | 49.19 | 65.24 |
| GSMUA_Achr11P... | Banana | nucleus | 47.58 | 65.19 |
| Os12t0139400-01 | Rice | nucleus | 52.82 | 65.17 |
| Solyc10g079600.1.1 | Tomato | nucleus | 58.87 | 64.32 |
| CDX79942 | Canola | nucleus | 55.24 | 63.72 |
| PGSC0003DMT400076726 | Potato | nucleus | 58.06 | 63.72 |
| Solyc10g079700.1.1 | Tomato | nucleus | 60.89 | 63.18 |
| CDX76036 | Canola | nucleus | 57.26 | 63.11 |
| Bra004615.1-P | Field mustard | nucleus | 54.44 | 63.08 |
| Os11t0143300-02 | Rice | cytosol | 52.82 | 62.98 |
| AT3G57040.1 | Thale cress | nucleus | 59.27 | 62.82 |
| CDY23856 | Canola | nucleus | 54.44 | 62.79 |
| PGSC0003DMT400007618 | Potato | nucleus | 54.03 | 62.62 |
| CDY06934 | Canola | cytosol | 56.05 | 62.61 |
| CDY35419 | Canola | nucleus | 54.44 | 62.5 |
| Bra000224.1-P | Field mustard | nucleus | 54.44 | 62.5 |
| CDY06142 | Canola | cytosol | 59.27 | 62.29 |
| Bra007295.1-P | Field mustard | cytosol | 59.27 | 62.29 |
| Bra016943.1-P | Field mustard | cytosol | 55.65 | 62.16 |
| CDX72077 | Canola | cytosol | 58.47 | 61.7 |
| KXG27703 | Sorghum | nucleus | 50.0 | 61.39 |
| CDY22518 | Canola | nucleus | 53.63 | 61.29 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 54.84 | 61.26 |
| CDY30966 | Canola | cytosol | 57.26 | 61.21 |
| KRH62857 | Soybean | nucleus | 45.56 | 61.08 |
| Bra014649.1-P | Field mustard | nucleus | 57.26 | 60.68 |
| AT2G41310.1 | Thale cress | nucleus | 54.84 | 60.44 |
| CDX67674 | Canola | cytosol | 56.85 | 60.26 |
| Bra003265.1-P | Field mustard | cytosol | 58.06 | 60.0 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 33.87 | 59.57 |
| KRH53721 | Soybean | cytosol | 31.85 | 58.09 |
| Os01t0952500-01 | Rice | cytosol | 52.02 | 55.6 |
| KRH64213 | Soybean | cytosol | 31.85 | 54.11 |
| Zm00001d011849_P002 | Maize | cytosol | 50.81 | 54.08 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 50.4 | 53.88 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 49.6 | 53.25 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 50.81 | 52.94 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 50.81 | 52.5 |
| EES02064 | Sorghum | cytosol | 51.61 | 52.24 |
| Zm00001d023242_P001 | Maize | nucleus | 29.03 | 51.8 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 50.0 | 50.82 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 50.0 | 50.0 |
| AT2G07440.1 | Thale cress | cytosol | 27.02 | 49.26 |
| Zm00001d052476_P001 | Maize | nucleus | 23.79 | 48.36 |
| KXG22820 | Sorghum | endoplasmic reticulum | 51.21 | 45.52 |
| KRH03376 | Soybean | nucleus | 37.9 | 45.41 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 48.79 | 44.98 |
| KRH53261 | Soybean | nucleus | 41.94 | 44.83 |
| KRH57009 | Soybean | nucleus | 37.5 | 44.08 |
| KRH64643 | Soybean | nucleus | 41.53 | 43.83 |
| KRH18706 | Soybean | nucleus | 37.1 | 43.19 |
| KRH63457 | Soybean | cytosol | 35.48 | 43.14 |
| KRH54462 | Soybean | cytosol | 35.48 | 43.14 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 30.24 | 42.61 |
| KRH45761 | Soybean | nucleus | 34.68 | 38.56 |
| KRH69443 | Soybean | nucleus | 36.69 | 37.92 |
| KRG99225 | Soybean | nucleus | 33.47 | 37.39 |
| KRH74701 | Soybean | nucleus | 36.69 | 37.3 |
Protein Annotations
| EntrezGene:100788079 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02002012 | EMBL:BT096926 | UniProt:C6TH15 |
| InterPro:CheY-like_superfamily | ncoils:Coil | EnsemblPlantsGene:GLYMA_03G130000 | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 |
| EnsemblPlants:KRH66808 | ProteinID:KRH66808 | ProteinID:KRH66808.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001B16DF8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:34467796..34470121
Molecular Weight (calculated)
28267.5 Da
IEP (calculated)
5.682
GRAVY (calculated)
-0.765
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAAAESQF HVLAVDDSII DRKLIERLLR TSSYQVTTVD SGSKALEFLG LRENDESNPS IPSVCPNNHQ PQEVEVNLVI TDYCMPGMTG YDLLKKIKES
101: SSLRNIPVVI MSSENVPSRI NRCLEEGAEE FFLKPVRLSD LNKLKPHMKK TKFKDQKQET VERFEDSEVQ QQQSQQQIII QNEHHQAPKL QVLQPESESE
201: SHPQPTIEQQ QQILQQANNN NKRKTMEQGL SPETDRTRPR YSGIATVV
101: SSLRNIPVVI MSSENVPSRI NRCLEEGAEE FFLKPVRLSD LNKLKPHMKK TKFKDQKQET VERFEDSEVQ QQQSQQQIII QNEHHQAPKL QVLQPESESE
201: SHPQPTIEQQ QQILQQANNN NKRKTMEQGL SPETDRTRPR YSGIATVV
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.