Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0837900-01 | |
| Os07t0184900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57040.1 | Os07t0184900-01 | AT1G16970.1 | 18642946 |
| AT3G57040.1 | Os03t0837900-01 | AT5G08720.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G178900.1 | Wheat | cytosol | 45.26 | 74.47 |
| EES02064 | Sorghum | cytosol | 76.72 | 72.65 |
| Zm00001d011849_P002 | Maize | cytosol | 72.84 | 72.53 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 75.0 | 72.5 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 37.93 | 71.54 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 44.4 | 70.55 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 42.24 | 70.0 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 73.28 | 68.55 |
| GSMUA_Achr11P... | Banana | nucleus | 54.31 | 68.11 |
| CDY65526 | Canola | cytosol | 44.4 | 65.19 |
| Solyc02g071220.2.1 | Tomato | nucleus | 46.55 | 65.06 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 53.88 | 64.77 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 52.59 | 64.55 |
| PGSC0003DMT400007977 | Potato | nucleus | 44.83 | 63.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.88 | 62.5 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 71.55 | 61.71 |
| GSMUA_Achr11P... | Banana | nucleus | 47.84 | 61.33 |
| KRH13391 | Soybean | nucleus | 46.12 | 59.78 |
| Os04t0524300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 34.05 | 58.96 |
| KRH20737 | Soybean | nucleus | 45.26 | 58.66 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 40.95 | 58.28 |
| Os12t0139400-01 | Rice | nucleus | 50.43 | 58.21 |
| KRH30056 | Soybean | nucleus | 46.55 | 57.75 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 53.88 | 57.34 |
| Os11t0143300-02 | Rice | cytosol | 50.43 | 56.25 |
| KRH62857 | Soybean | nucleus | 44.83 | 56.22 |
| CDY35419 | Canola | nucleus | 51.29 | 55.09 |
| Bra000224.1-P | Field mustard | nucleus | 51.29 | 55.09 |
| CDX79942 | Canola | nucleus | 50.86 | 54.88 |
| Bra004615.1-P | Field mustard | nucleus | 50.43 | 54.67 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 51.72 | 54.55 |
| CDY23856 | Canola | nucleus | 50.43 | 54.42 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 45.69 | 53.81 |
| CDY22518 | Canola | nucleus | 50.0 | 53.46 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 50.86 | 53.15 |
| CDY06934 | Canola | cytosol | 50.86 | 53.15 |
| Bra016943.1-P | Field mustard | cytosol | 50.86 | 53.15 |
| KRG95133 | Soybean | nucleus | 56.03 | 52.85 |
| CDX72077 | Canola | cytosol | 53.45 | 52.77 |
| PGSC0003DMT400076758 | Potato | nucleus | 51.29 | 52.65 |
| CDX76036 | Canola | nucleus | 50.86 | 52.44 |
| Os02t0631700-01 | Rice | plastid | 33.19 | 52.38 |
| PGSC0003DMT400007618 | Potato | nucleus | 48.28 | 52.34 |
| KRH66808 | Soybean | nucleus | 55.6 | 52.02 |
| AT2G41310.1 | Thale cress | nucleus | 50.43 | 52.0 |
| AT3G57040.1 | Thale cress | nucleus | 52.16 | 51.71 |
| Bra007295.1-P | Field mustard | cytosol | 52.59 | 51.69 |
| CDY06142 | Canola | cytosol | 52.16 | 51.27 |
| Solyc10g079600.1.1 | Tomato | nucleus | 50.0 | 51.1 |
| PGSC0003DMT400076726 | Potato | nucleus | 49.14 | 50.44 |
| Bra014649.1-P | Field mustard | nucleus | 50.86 | 50.43 |
| CDY30966 | Canola | cytosol | 49.57 | 49.57 |
| CDX67674 | Canola | cytosol | 49.57 | 49.15 |
| Solyc10g079700.1.1 | Tomato | nucleus | 50.43 | 48.95 |
| Bra003265.1-P | Field mustard | cytosol | 50.0 | 48.33 |
| Os08t0377200-01 | Rice | cytosol | 24.57 | 47.11 |
| Os04t0673300-01 | Rice | plastid | 34.48 | 47.06 |
| KRH64643 | Soybean | nucleus | 46.55 | 45.96 |
| KRH53261 | Soybean | nucleus | 45.26 | 45.26 |
| Os08t0376700-01 | Rice | cytosol | 23.28 | 44.63 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 44.4 | 44.4 |
| KRH18706 | Soybean | nucleus | 40.52 | 44.13 |
| AT2G07440.1 | Thale cress | cytosol | 22.41 | 38.24 |
| Os07t0449700-01 | Rice | cytosol, nucleus, plastid | 33.19 | 37.38 |
| Os08t0358800-01 | Rice | cytosol | 21.12 | 36.3 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 27.16 | 35.8 |
| Os04t0442300-01 | Rice | cytosol | 29.74 | 29.87 |
| Os02t0557800-01 | Rice | cytosol, golgi, nucleus | 32.33 | 29.76 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:4325747 | EMBL:AB249658 | EMBL:AK101721 | ProteinID:BAB64697.1 |
| ProteinID:BAF07334.1 | ProteinID:BAS76254.1 | InterPro:CheY-like_superfamily | ProteinID:EAZ14855.1 | ProteinID:FAA00262.1 | GO:GO:0000160 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009736 | GO:GO:0009987 | InterPro:IPR001789 | EnsemblPlantsGene:Os01g0952500 |
| EnsemblPlants:Os01t0952500-01 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF31 | UniProt:Q942A1 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00000AB127 | RefSeq:XP_015641147.1 | SEG:seg |
Description
A-TYPE RESPONSE REGULATOR 4A-type response regulator, Cytokinin signaling (Os01t0952500-01)
Coordinates
chr1:+:41948952..41952388
Molecular Weight (calculated)
24864.6 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.317
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVDAESRF HVLAVDDSLI DRKLIEMLLK NSSYQVTTVD SGSKALELLG LRDEGDDSSS SPSSSSPDHQ EIDVNLIITD YCMPGMTGYD LLKRVKGSSS
101: LKDIPVVIMS SENVPARINR CLEDGAEEFF LKPVKLADMK KLKSHLLKRK QQLPMAAAAP DKPPHKPDEA AASAAAIAEA ATAQTDGIIS DCSCSGSSKR
201: KAAAMEQEVI SSPDQRTKPR LSSTSSGLAV ET
101: LKDIPVVIMS SENVPARINR CLEDGAEEFF LKPVKLADMK KLKSHLLKRK QQLPMAAAAP DKPPHKPDEA AASAAAIAEA ATAQTDGIIS DCSCSGSSKR
201: KAAAMEQEVI SSPDQRTKPR LSSTSSGLAV ET
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.