Factsheet for Os04t0442300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G308000.1	Wheat	cytosol	72.29	75.91
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	72.29	75.91
KXG26371	Sorghum	cytosol, golgi, nucleus	71.0	71.93
TraesCS2A01G309700.1	Wheat	cytosol	70.56	70.26
EES10856	Sorghum	plasma membrane	74.03	68.67
GSMUA_Achr6P29050_001	Banana	nucleus	14.29	58.93
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	58.87	56.67
GSMUA_Achr3P16640_001	Banana	cytosol	41.13	53.67
Os02t0557800-01	Rice	cytosol, golgi, nucleus	58.01	53.17
Os04t0524300-01	Rice	cytosol, mitochondrion, nucleus, plastid	30.3	52.24
GSMUA_Achr6P29010_001	Banana	nucleus	41.56	51.61
GSMUA_Achr8P29210_001	Banana	nucleus	40.69	50.54
Os02t0631700-01	Rice	plastid	30.74	48.3
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	23.38	48.21
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	59.31	47.4
Zm00001d003598_P003	Maize	nucleus	63.2	45.91
Os08t0376700-01	Rice	cytosol	22.51	42.98
Os08t0377200-01	Rice	cytosol	22.08	42.15
Os04t0673300-01	Rice	plastid	28.57	38.82
Os08t0358800-01	Rice	cytosol	19.05	32.59
Os12t0139400-01	Rice	nucleus	28.14	32.34
Os11t0143300-02	Rice	cytosol	28.57	31.73
Os07t0449700-01	Rice	cytosol, nucleus, plastid	27.27	30.58
Os01t0952500-01	Rice	cytosol	29.87	29.74

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EntrezGene:4335937	EMBL:AB249661	EMBL:AK072736	EMBL:AK105815
ProteinID:BAF14796.1	ProteinID:BAS89358.1	EMBL:BX548156	InterPro:CheY-like_superfamily	ProteinID:FAA00263.1	GO:GO:0000160
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	GO:GO:0048830	InterPro:IPR001789	EnsemblPlantsGene:Os04g0442300
EnsemblPlants:Os04t0442300-01	PFAM:PF00072	PFscan:PS50110	PFscan:PS51257	PANTHER:PTHR43874	PANTHER:PTHR43874:SF28
UniProt:Q2HWG4	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI000069659F
RefSeq:XP_015636992.1	SEG:seg	:	:	:	:

Description

A-TYPE RESPONSE REGULATOR 1A-type response regulator, Cytokinin signaling (Os04t0442300-01);A-type response regulator, Cytokinin signaling (Os04t0442300-02)

Coordinates

chr4:-:22023832..22027680

Molecular Weight (calculated)

25268.9 Da

IEP (calculated)

7.050

GRAVY (calculated)

0.138

Length

231 amino acids

Sequence
(BLAST)

001: MEGGRGVTRV LLVDDSPVDR RVVQLLLSSS ACAGSFHVIA VDSAKKAMEF LGLKEEGKEQ AIDMVLTDYC MPEMTGYELL KAIKALSPLK PIPVIVMSSE
101: NEPQRISRCM NAGAEDFIVK PLQSKDVQRL RNCSPANTQC CDAGSDGKPP LLLLPSDHVV VDATAASPPP PPSRRRAHFA GVAMVLHSSS VELSHYFPFL
201: FKFILLVYAI LCLGELLHRW SNGCFLNLWC A

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.