CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26371	Sorghum	cytosol, golgi, nucleus	84.74	92.54
Os04t0442300-01	Rice	cytosol	68.67	74.03
TraesCS2D01G308000.1	Wheat	cytosol	61.45	69.55
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	61.04	69.09
TraesCS2A01G309700.1	Wheat	cytosol	59.84	64.22
EES05247	Sorghum	cytosol	38.55	57.14
GSMUA_Achr6P29050_001	Banana	nucleus	12.85	57.14
Zm00001d003598_P003	Maize	nucleus	69.48	54.4
GSMUA_Achr3P16640_001	Banana	cytosol	38.55	54.24
EES12531	Sorghum	nucleus	28.11	52.24
GSMUA_Achr8P29210_001	Banana	nucleus	38.15	51.08
GSMUA_Achr6P29010_001	Banana	nucleus	37.75	50.54
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	21.29	47.32
EER99112	Sorghum	cytosol	22.09	44.72
EES07188	Sorghum	plastid	26.91	44.37
EES14894	Sorghum	cytosol	21.69	43.9
OQU86020	Sorghum	plastid	25.7	43.84
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	49.4	42.56
EER96309	Sorghum	cytosol	24.9	36.9
EES11637	Sorghum	plastid	24.5	35.88
KXG27703	Sorghum	nucleus	26.91	33.17
OQU80317	Sorghum	cytosol	17.67	31.21
EES02064	Sorghum	cytosol	29.32	29.8
KXG22820	Sorghum	endoplasmic reticulum	27.71	24.73

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EntrezGene:8075848	UniProt:C5Y8V6	InterPro:CheY-like_superfamily	EnsemblPlants:EES10856
ProteinID:EES10856	ProteinID:EES10856.1	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF28	SMART:SM00448	EnsemblPlantsGene:SORBI_3006G090300	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0001A86D3A	RefSeq:XP_002446528.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:46040189..46043797

Molecular Weight (calculated)

26235.9 Da

IEP (calculated)

7.972

GRAVY (calculated)

0.133

Length

249 amino acids

Sequence
(BLAST)

001: MEAAAGVEVE EGVMRVLLVD DSPVDRRVAQ LLLSSNSCAG SFHVIAVDSA KKAMEFLGLK DGGGKEQAID MVLTDYCMPE MTGYDLLKAI KALNPLKPIP
101: VIVMSSEDEP QRISRCLSAG AEDFIVKPLQ SKDVQRLRNC STTAAARPSS KGAAAPCEAA AVAKRNSNKP PLVLPPSSAA AAATSPSSGR RPNLAGVAMV
201: LQSSSVELSQ YLPLLLKLIV LAYAVLCLGE LLHRWSSSGG RCSLSPWCA

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.