CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026594_P001	Maize	cytosol	81.76	87.42
Zm00001d001865_P001	Maize	plastid	77.65	84.62
GSMUA_Achr1P17800_001	Banana	cytosol	61.18	79.39
GSMUA_Achr10P...	Banana	nucleus	62.35	77.37
Os04t0673300-01	Rice	plastid	76.47	76.47
HORVU2Hr1G120490.2	Barley	plastid	77.65	76.3
TraesCS2B01G582300.1	Wheat	cytosol	77.06	76.16
TraesCS2D01G552200.1	Wheat	plastid	78.82	76.14
TraesCS2A01G551100.1	Wheat	plastid	78.82	76.14
EES12531	Sorghum	nucleus	58.82	74.63
GSMUA_AchrUn_...	Banana	nucleus	60.0	73.91
OQU86020	Sorghum	plastid	55.29	64.38
EES07188	Sorghum	plastid	55.29	62.25
EER96309	Sorghum	cytosol	55.29	55.95
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	67.06	54.55
EER99112	Sorghum	cytosol	35.88	49.59
EES14894	Sorghum	cytosol	35.29	48.78
KXG27703	Sorghum	nucleus	44.12	37.13
EES05247	Sorghum	cytosol	35.29	35.71
OQU80317	Sorghum	cytosol	28.82	34.75
EES02064	Sorghum	cytosol	45.88	31.84
KXG22820	Sorghum	endoplasmic reticulum	46.47	28.32
KXG26371	Sorghum	cytosol, golgi, nucleus	34.71	25.88
EES10856	Sorghum	plasma membrane	35.88	24.5

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.12740	EntrezGene:8085850	UniProt:C5YA64	InterPro:CheY-like_superfamily	EnsemblPlants:EES11637
ProteinID:EES11637	ProteinID:EES11637.1	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	PFAM:PF00072
PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF38	SMART:SM00448	EnsemblPlantsGene:SORBI_3006G263300	SUPFAM:SSF52172
unigene:Sbi.17620	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0001A872EC	RefSeq:XP_002447309.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:59809319..59810536

Molecular Weight (calculated)

18501.5 Da

IEP (calculated)

5.847

GRAVY (calculated)

0.010

Length

170 amino acids

Sequence
(BLAST)

001: MAAAAAPSVS PSPSPATAPA PKVVSPKAGD RKVVPVDAVE VELKLELEEK HVLAVDDSSV DRAVIAKILR SSKYRVTTVE SATRALELLA LGLLPDVNMI
101: ITDYWMPGMT GYELLKHVKE SSELREIPVV IMSSENVPTR ITRCLEEGAE DFLLKPVRPS DVSRLCSRIR

Best Arabidopsis Sequence Match ( AT1G10470.1 )
(BLAST)

001: MARDGGVSCL RRSEMMSVGG IGGIESAPLD LDEVHVLAVD DSLVDRIVIE RLLRITSCKV TAVDSGWRAL EFLGLDNEKA SAEFDRLKVD LIITDYCMPG
101: MTGYELLKKI KESSNFREVP VVIMSSENVL TRIDRCLEEG AQDFLLKPVK LADVKRLRSH LTKDVKLSNG NKRKLPEDSS SVNSSLPPPS PPLTISPESS
201: PPLTVSTESS DSSPPLSPVE IFSTSPLSSP IDDEDDDVLT SSSEESPIRR QKMRSPGLD

Arabidopsis Description

ARR4Two-component response regulator ARR4 [Source:UniProtKB/Swiss-Prot;Acc:O82798]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.