Factsheet for GSMUA_Achr1P07020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	57.42	87.59
GSMUA_Achr1P17800_001	Banana	cytosol	53.59	85.5
GSMUA_AchrUn_...	Banana	nucleus	54.55	82.61
EES12531	Sorghum	nucleus	49.28	76.87
Zm00001d002982_P001	Maize	cytosol, nucleus, plastid	49.28	76.3
TraesCS2A01G377900.1	Wheat	cytosol	48.8	75.56
TraesCS2B01G394900.1	Wheat	cytosol	48.8	75.56
TraesCS2D01G374300.1	Wheat	cytosol	48.8	75.56
HORVU2Hr1G090270.1	Barley	plastid	48.33	74.81
Os04t0524300-01	Rice	cytosol, mitochondrion, nucleus, plastid	47.37	73.88
TraesCS6A01G221800.1	Wheat	vacuole	37.32	72.22
Os02t0631700-01	Rice	plastid	48.33	68.71
TraesCS6B01G259700.1	Wheat	plastid	46.89	68.53
Os04t0673300-01	Rice	plastid	55.5	68.24
Zm00001d001865_P001	Maize	plastid	50.72	67.95
Zm00001d026594_P001	Maize	cytosol	51.2	67.3
OQU86020	Sorghum	plastid	46.89	67.12
EES11637	Sorghum	plastid	54.55	67.06
TraesCS6D01G213700.2	Wheat	plastid	46.89	66.22
HORVU2Hr1G120490.2	Barley	plastid	54.07	65.32
TraesCS2B01G582300.1	Wheat	cytosol	53.59	65.12
TraesCS2D01G552200.1	Wheat	plastid	54.07	64.2
TraesCS2A01G551100.1	Wheat	plastid	54.07	64.2
EES07188	Sorghum	plastid	45.45	62.91
Zm00001d019555_P002	Maize	cytosol	43.54	61.49
TraesCS6A01G416400.1	Wheat	nucleus	51.67	59.02
GSMUA_Achr6P29050_001	Banana	nucleus	15.31	57.14
EER96309	Sorghum	cytosol	45.93	57.14
TraesCS6D01G401600.1	Wheat	plastid	51.2	55.15
Zm00001d017307_P001	Maize	mitochondrion	41.15	47.78
Os07t0449700-01	Rice	cytosol, nucleus, plastid	44.98	45.63
GSMUA_Achr11P...	Banana	nucleus	37.8	42.7
GSMUA_Achr3P08680_001	Banana	cytosol	37.32	41.27
GSMUA_AchrUn_...	Banana	nucleus	39.23	41.0
GSMUA_Achr5P08230_001	Banana	nucleus	37.8	40.93
GSMUA_Achr11P...	Banana	nucleus	35.41	40.88
GSMUA_Achr3P16640_001	Banana	cytosol	33.01	38.98
GSMUA_Achr8P29210_001	Banana	nucleus	33.97	38.17
GSMUA_Achr6P29010_001	Banana	nucleus	33.49	37.63
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	25.36	37.59
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	18.66	34.82
GSMUA_Achr8P32360_001	Banana	cytosol	31.58	34.02
GSMUA_Achr6P18540_001	Banana	nucleus	32.06	33.0
HORVU6Hr1G059200.1	Barley	cytosol, plastid	30.14	32.81
GSMUA_Achr8P09640_001	Banana	cytosol	17.22	20.45

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G07020_001
EnsemblPlants:GSMUA_Achr1P07020_001	EnsemblPlants:GSMUA_Achr1T07020_001	InterPro:IPR001789	UniProt:M0RXR0	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF38	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002960760
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G07020_001]

Coordinates

chr1:-:5571262..5573987

Molecular Weight (calculated)

23005.5 Da

IEP (calculated)

5.867

GRAVY (calculated)

-0.174

Length

209 amino acids

Sequence
(BLAST)

001: MTRIGSLSHR YEGTSRLSLS IGYSAPWDSY NGDLVGISCS LFSVFAAAAS PPYIRRFEEE GVACGWLDSS ASVMSSSRGG NGCGGEGERQ IHVLAVDDSS
101: VDRAMIARIL RSSKYRVTTV DSGKKALELL GLEPDVNMII TDYWMPEMTG YELLKRVKES SELREIPVVI MSSENVPNRI NRCLAEGAED FLLKPVRPSD
201: VSRLCSRIR

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.