Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G401600.1 | Wheat | plastid | 85.79 | 80.93 |
| OQU86020 | Sorghum | plastid | 61.2 | 76.71 |
| GSMUA_Achr10P... | Banana | nucleus | 52.46 | 70.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.27 | 66.67 |
| TraesCS2A01G377900.1 | Wheat | cytosol | 49.18 | 66.67 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 47.54 | 66.41 |
| TraesCS6A01G221800.1 | Wheat | vacuole | 38.25 | 64.81 |
| TraesCS2A01G551100.1 | Wheat | plastid | 50.82 | 52.84 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 59.02 | 51.67 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 44.81 | 34.45 |
| TraesCS2A01G309700.1 | Wheat | cytosol | 36.07 | 28.45 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G416400.1 | EnsemblPlantsGene:TraesCS6A01G416400 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF13 | PFAM:PF00072 | PFscan:PS50110 | SMART:SM00448 | SUPFAM:SSF52172 | TIGR:cd00156 |
| MapMan:11.4.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:615462418..615464213
Molecular Weight (calculated)
20099.5 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.052
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSHAIRWS MDAGTLNGSP DAEELTPTSL KNGLLQASPS SIPFCCLCPM STTVQEPPHV LAVDDSLVDR VVISRLLRSS KYRVTTVDSG KKALEVLSLG
101: HESVQLIITD YCMPEMTGYD LLKRVKESAE LRGIPVVIMS SENSPTRIRR CLDEGAEEFL IKPVRPSDVS RLCSRAIAAM PMR
101: HESVQLIITD YCMPEMTGYD LLKRVKESAE LRGIPVVIMS SENSPTRIRR CLDEGAEEFL IKPVRPSDVS RLCSRAIAAM PMR
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.