Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G259700.1 | Wheat | plastid | 91.67 | 69.23 |
| TraesCS6D01G213700.2 | Wheat | plastid | 91.67 | 66.89 |
| TraesCS2A01G377900.1 | Wheat | cytosol | 80.56 | 64.44 |
| Os02t0631700-01 | Rice | plastid | 87.04 | 63.95 |
| EES07188 | Sorghum | plastid | 84.26 | 60.26 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 71.3 | 58.78 |
| GSMUA_Achr10P... | Banana | nucleus | 74.07 | 58.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 71.3 | 55.8 |
| TraesCS2A01G551100.1 | Wheat | plastid | 71.3 | 43.75 |
| TraesCS6A01G416400.1 | Wheat | nucleus | 64.81 | 38.25 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 72.22 | 37.32 |
| Zm00001d017307_P001 | Maize | mitochondrion | 59.26 | 35.56 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 60.19 | 27.31 |
| TraesCS2A01G309700.1 | Wheat | cytosol | 54.63 | 25.43 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G221800.1 | EnsemblPlantsGene:TraesCS6A01G221800 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF18 | PFAM:PF00072 | PFscan:PS50110 | SMART:SM00448 | SUPFAM:SSF52172 | TIGR:cd00156 |
| MapMan:11.4.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:412848770..412849492
Molecular Weight (calculated)
12221.0 Da
IEP (calculated)
7.361
GRAVY (calculated)
-0.060
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSDRVHLLL VSWAVTAVDS GKRALELLGS EPNVSMIITD YWMPEMTGYE LLKKVKESST LKQIPVVIMS SENVPTRISR CLEEGAEDFL MKPVRPSDVS
101: RVFNRVLP
101: RVFNRVLP
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.