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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G259700.1 Wheat plastid 85.71 88.11
TraesCS6A01G221800.1 Wheat vacuole 63.95 87.04
TraesCS6D01G213700.2 Wheat plastid 84.35 83.78
Os04t0524300-01 Rice cytosol, mitochondrion, nucleus, plastid 75.51 82.84
EES07188 Sorghum plastid 82.31 80.13
GSMUA_Achr1P17800_001 Banana cytosol 67.35 75.57
GSMUA_Achr10P... Banana nucleus 69.39 74.45
GSMUA_AchrUn_... Banana nucleus 67.35 71.74
Os04t0673300-01 Rice plastid 70.75 61.18
Zm00001d017307_P001 Maize mitochondrion 61.9 50.56
Os08t0376700-01 Rice cytosol 40.82 49.59
Os08t0377200-01 Rice cytosol 40.14 48.76
Os07t0449700-01 Rice cytosol, nucleus, plastid 68.03 48.54
GSMUA_Achr1P07020_001 Banana mitochondrion, plastid 68.71 48.33
Os12t0139400-01 Rice nucleus 53.74 39.3
Os11t0143300-02 Rice cytosol 53.74 37.98
Os08t0358800-01 Rice cytosol 31.97 34.81
Os01t0952500-01 Rice cytosol 52.38 33.19
Os04t0442300-01 Rice cytosol 48.3 30.74
Os02t0557800-01 Rice cytosol, golgi, nucleus 46.26 26.98
Protein Annotations
MapMan:11.4.2.5Gene3D:3.40.50.2300EntrezGene:4330059EMBL:AB249656ProteinID:BAD26481.1ProteinID:BAF09415.1
ProteinID:BAS79907.1InterPro:CheY-like_superfamilyProteinID:EEE57421.1ProteinID:FAA00270.1GO:GO:0000160GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009736
GO:GO:0009987InterPro:IPR001789EnsemblPlantsGene:Os02g0631700EnsemblPlants:Os02t0631700-01PFAM:PF00072PFscan:PS50110
PANTHER:PTHR43874PANTHER:PTHR43874:SF16UniProt:Q6H468SMART:SM00448SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiver
UniParc:UPI00003B4715RefSeq:XP_015624257.1SEG:seg:::
Description
A-TYPE RESPONSE REGULATOR 11A-type response regulator, Cytokinin signaling (Os02t0631700-01)
Coordinates
chr2:-:25286967..25287842
Molecular Weight (calculated)
15464.9 Da
IEP (calculated)
9.165
GRAVY (calculated)
0.212
Length
147 amino acids
Sequence
(BLAST)
001: MSSIGAGAGG AVVGAAVAAV AVGGGAPPHV LAVDDSSVDR AVIAGILRSS RFRVTAVDSG KRALELLGSE PNVSMIITDY WMPEMTGYEL LKKVKESSKL
101: KKIPVVIMSS ENVPTRISRC LEEGAEDFLV KPVRPSDVSR LFSRVLP
Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.