Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G259700.1 | Wheat | plastid | 85.71 | 88.11 |
TraesCS6A01G221800.1 | Wheat | vacuole | 63.95 | 87.04 |
TraesCS6D01G213700.2 | Wheat | plastid | 84.35 | 83.78 |
Os04t0524300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 75.51 | 82.84 |
EES07188 | Sorghum | plastid | 82.31 | 80.13 |
GSMUA_Achr1P17800_001 | Banana | cytosol | 67.35 | 75.57 |
GSMUA_Achr10P... | Banana | nucleus | 69.39 | 74.45 |
GSMUA_AchrUn_... | Banana | nucleus | 67.35 | 71.74 |
Os04t0673300-01 | Rice | plastid | 70.75 | 61.18 |
Zm00001d017307_P001 | Maize | mitochondrion | 61.9 | 50.56 |
Os08t0376700-01 | Rice | cytosol | 40.82 | 49.59 |
Os08t0377200-01 | Rice | cytosol | 40.14 | 48.76 |
Os07t0449700-01 | Rice | cytosol, nucleus, plastid | 68.03 | 48.54 |
GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 68.71 | 48.33 |
Os12t0139400-01 | Rice | nucleus | 53.74 | 39.3 |
Os11t0143300-02 | Rice | cytosol | 53.74 | 37.98 |
Os08t0358800-01 | Rice | cytosol | 31.97 | 34.81 |
Os01t0952500-01 | Rice | cytosol | 52.38 | 33.19 |
Os04t0442300-01 | Rice | cytosol | 48.3 | 30.74 |
Os02t0557800-01 | Rice | cytosol, golgi, nucleus | 46.26 | 26.98 |
Protein Annotations
MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:4330059 | EMBL:AB249656 | ProteinID:BAD26481.1 | ProteinID:BAF09415.1 |
ProteinID:BAS79907.1 | InterPro:CheY-like_superfamily | ProteinID:EEE57421.1 | ProteinID:FAA00270.1 | GO:GO:0000160 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009736 |
GO:GO:0009987 | InterPro:IPR001789 | EnsemblPlantsGene:Os02g0631700 | EnsemblPlants:Os02t0631700-01 | PFAM:PF00072 | PFscan:PS50110 |
PANTHER:PTHR43874 | PANTHER:PTHR43874:SF16 | UniProt:Q6H468 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
UniParc:UPI00003B4715 | RefSeq:XP_015624257.1 | SEG:seg | : | : | : |
Description
A-TYPE RESPONSE REGULATOR 11A-type response regulator, Cytokinin signaling (Os02t0631700-01)
Coordinates
chr2:-:25286967..25287842
Molecular Weight (calculated)
15464.9 Da
IEP (calculated)
9.165
GRAVY (calculated)
0.212
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIGAGAGG AVVGAAVAAV AVGGGAPPHV LAVDDSSVDR AVIAGILRSS RFRVTAVDSG KRALELLGSE PNVSMIITDY WMPEMTGYEL LKKVKESSKL
101: KKIPVVIMSS ENVPTRISRC LEEGAEDFLV KPVRPSDVSR LFSRVLP
101: KKIPVVIMSS ENVPTRISRC LEEGAEDFLV KPVRPSDVSR LFSRVLP
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.