CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G221800.1	Wheat	vacuole	60.26	84.26
EES12531	Sorghum	nucleus	74.17	83.58
TraesCS6B01G259700.1	Wheat	plastid	78.81	83.22
Os02t0631700-01	Rice	plastid	80.13	82.31
TraesCS6D01G213700.2	Wheat	plastid	77.48	79.05
GSMUA_Achr1P17800_001	Banana	cytosol	62.25	71.76
GSMUA_Achr10P...	Banana	nucleus	64.24	70.8
GSMUA_AchrUn_...	Banana	nucleus	60.93	66.67
OQU86020	Sorghum	plastid	57.62	59.59
EER96309	Sorghum	cytosol	64.9	58.33
Zm00001d017307_P001	Maize	mitochondrion	66.23	55.56
EES11637	Sorghum	plastid	62.25	55.29
EER99112	Sorghum	cytosol	41.72	51.22
EES14894	Sorghum	cytosol	41.06	50.41
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	62.91	45.45
EES05247	Sorghum	cytosol	43.05	38.69
KXG27703	Sorghum	nucleus	49.67	37.13
OQU80317	Sorghum	cytosol	32.45	34.75
EES02064	Sorghum	cytosol	50.99	31.43
KXG26371	Sorghum	cytosol, golgi, nucleus	41.72	27.63
EES10856	Sorghum	plasma membrane	44.37	26.91
KXG22820	Sorghum	endoplasmic reticulum	49.01	26.52

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EntrezGene:8066179	UniProt:C5XY52	InterPro:CheY-like_superfamily	EnsemblPlants:EES07188
ProteinID:EES07188	ProteinID:EES07188.1	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:IPR001789	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF16
SMART:SM00448	EnsemblPlantsGene:SORBI_3004G223100	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0001A85FB4
RefSeq:XP_002454212.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:57358665..57360047

Molecular Weight (calculated)

15776.1 Da

IEP (calculated)

9.180

GRAVY (calculated)

0.286

Length

151 amino acids

Sequence
(BLAST)

001: MASVVGGAAA VASAAAAAAA AAGGAAGVGA TPHVLAVDDS SVDRAIIAAI LRSSRFRVTA VESGKRALEL LGTEPNVSMI ITDYWMPEMT GYELLKKVKE
101: SSKLKQIPVV IMSSENVSTR ISRCLEEGAE DFLVKPVRAS DVSRVFSRVL R

Best Arabidopsis Sequence Match ( AT1G10470.1 )
(BLAST)

001: MARDGGVSCL RRSEMMSVGG IGGIESAPLD LDEVHVLAVD DSLVDRIVIE RLLRITSCKV TAVDSGWRAL EFLGLDNEKA SAEFDRLKVD LIITDYCMPG
101: MTGYELLKKI KESSNFREVP VVIMSSENVL TRIDRCLEEG AQDFLLKPVK LADVKRLRSH LTKDVKLSNG NKRKLPEDSS SVNSSLPPPS PPLTISPESS
201: PPLTVSTESS DSSPPLSPVE IFSTSPLSSP IDDEDDDVLT SSSEESPIRR QKMRSPGLD

Arabidopsis Description

ARR4Two-component response regulator ARR4 [Source:UniProtKB/Swiss-Prot;Acc:O82798]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.