Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G213700.2 | Wheat | plastid | 97.9 | 94.59 |
| TraesCS6A01G221800.1 | Wheat | vacuole | 69.23 | 91.67 |
| Os02t0631700-01 | Rice | plastid | 88.11 | 85.71 |
| TraesCS2B01G394900.1 | Wheat | cytosol | 78.32 | 82.96 |
| EES07188 | Sorghum | plastid | 83.22 | 78.81 |
| GSMUA_Achr10P... | Banana | nucleus | 70.63 | 73.72 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 66.43 | 72.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 68.53 | 71.01 |
| TraesCS2B01G582300.1 | Wheat | cytosol | 68.53 | 56.98 |
| Zm00001d017307_P001 | Maize | mitochondrion | 60.84 | 48.33 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 68.53 | 46.89 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 41.96 | 42.55 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 54.55 | 33.62 |
| TraesCS2B01G326800.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 47.55 | 30.91 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 51.75 | 30.83 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G259700.1 | EnsemblPlantsGene:TraesCS6B01G259700 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF16 | PFAM:PF00072 | PFscan:PS50110 | SMART:SM00448 | SUPFAM:SSF52172 | TIGR:cd00156 |
| MapMan:11.4.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:469707108..469707948
Molecular Weight (calculated)
15395.7 Da
IEP (calculated)
8.491
GRAVY (calculated)
0.102
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVAGGVVG RTAVFSAAGG GAPLHVLAVD DSSVDRAVIS GILRSSRFRV TAVDSGKRAL ELLGSEPNVS MIITDYWMPE MTGYELLKKV KESSTLKQIP
101: VVIMSSENVP TRISRCLEEG AEDFLMKPVR PSDVSRVFNR VLP
101: VVIMSSENVP TRISRCLEEG AEDFLMKPVR PSDVSRVFNR VLP
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.