Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0377200-01 | Rice | cytosol | 51.77 | 60.33 |
| EER99112 | Sorghum | cytosol | 52.48 | 60.16 |
| Os08t0376700-01 | Rice | cytosol | 51.06 | 59.5 |
| EES14894 | Sorghum | cytosol | 51.06 | 58.54 |
| Zm00001d050200_P001 | Maize | extracellular | 44.68 | 50.81 |
| Os08t0358800-01 | Rice | cytosol | 43.26 | 45.19 |
| EES12531 | Sorghum | nucleus | 36.17 | 38.06 |
| OQU86020 | Sorghum | plastid | 34.75 | 33.56 |
| EES07188 | Sorghum | plastid | 34.75 | 32.45 |
| EER96309 | Sorghum | cytosol | 35.46 | 29.76 |
| EES11637 | Sorghum | plastid | 34.75 | 28.82 |
| EES05247 | Sorghum | cytosol | 31.91 | 26.79 |
| KXG27703 | Sorghum | nucleus | 30.5 | 21.29 |
| EES02064 | Sorghum | cytosol | 34.75 | 20.0 |
| KXG26371 | Sorghum | cytosol, golgi, nucleus | 31.91 | 19.74 |
| EES10856 | Sorghum | plasma membrane | 31.21 | 17.67 |
| KXG22820 | Sorghum | endoplasmic reticulum | 31.21 | 15.77 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:8069888 | UniProt:A0A1Z5R9D0 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:IPR001789 | EnsemblPlants:OQU80317 | ProteinID:OQU80317 | ProteinID:OQU80317.1 | PFAM:PF00072 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF33 | SMART:SM00448 | EnsemblPlantsGene:SORBI_3007G109400 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001A87934 | RefSeq:XP_002445400.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:39453391..39454467
Molecular Weight (calculated)
15771.3 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.055
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSNNGNDP KGKSVMTTIT NNSPWVLIVE NCQVDYFVTS YLLRGHNVQV IAVQGPLQAL ELLNAEHNVK LILSNYWMPN MTGYDLLMEM KKSPKLSHLP
101: VVITSFDKSP EVVKKCLDGG AKDYIIKPIK HADVPRILSF I
101: VVITSFDKSP EVVKKCLDGG AKDYIIKPIK HADVPRILSF I
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.