Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032381_P001 | Maize | cytosol | 62.9 | 63.41 |
| Os08t0376700-01 | Rice | cytosol | 55.65 | 57.02 |
| Os08t0377200-01 | Rice | cytosol | 55.65 | 57.02 |
| OQU80317 | Sorghum | cytosol | 50.81 | 44.68 |
| Zm00001d002982_P001 | Maize | cytosol, nucleus, plastid | 48.39 | 44.44 |
| Os08t0358800-01 | Rice | cytosol | 46.77 | 42.96 |
| Zm00001d019555_P002 | Maize | cytosol | 44.35 | 37.16 |
| Zm00001d026594_P001 | Maize | cytosol | 45.16 | 35.22 |
| Zm00001d001865_P001 | Maize | plastid | 42.74 | 33.97 |
| Zm00001d011849_P002 | Maize | cytosol | 45.16 | 24.03 |
| Zm00001d017307_P001 | Maize | mitochondrion | 34.68 | 23.89 |
| Zm00001d052476_P001 | Maize | nucleus | 23.39 | 23.77 |
| Zm00001d023242_P001 | Maize | nucleus | 24.19 | 21.58 |
| Zm00001d050768_P003 | Maize | cytosol, endoplasmic reticulum, nucleus | 39.52 | 20.25 |
| Zm00001d003598_P003 | Maize | nucleus | 41.94 | 16.35 |
| Zm00001d025472_P002 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 29.84 | 15.42 |
Protein Annotations
| EntrezGene:103653387 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:AM085299 | ProteinID:AQK52099.1 | InterPro:CheY-like_superfamily |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | EMBL:KJ728356 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF33 | UniProt:Q1JSA0 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| UniParc:UPI0000D74C50 | EnsemblPlantsGene:Zm00001d050200 | EnsemblPlants:Zm00001d050200_P001 | EnsemblPlants:Zm00001d050200_T001 | : | : |
Description
transfer cell response regulator1 transfer cell response regulator1
Coordinates
chr4:+:73314108..73315352
Molecular Weight (calculated)
13835.9 Da
IEP (calculated)
4.558
GRAVY (calculated)
0.251
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQSPHVLV VDHSRVDCLV ASIVLNSFNI RVTVAGGAME ALEFLDANNS HVDLILTDYC MPDMTGYDLL REVKESPRLK HIPVVITCTD VIPERIIECF
101: EGGAEEYMIK PLKVSDVPRI LSYM
101: EGGAEEYMIK PLKVSDVPRI LSYM
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.