Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d007807_P006 | |
| Zm00001d034779_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57040.1 | Zm00001d007807_P006 | AT1G16970.1 | 18642946 |
| AT3G57040.1 | Zm00001d034779_P001 | AT5G08720.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02064 | Sorghum | cytosol | 83.69 | 79.59 |
| Os01t0952500-01 | Rice | cytosol | 72.53 | 72.84 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 43.35 | 71.63 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 36.05 | 68.29 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 67.81 | 65.83 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 41.2 | 65.75 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 39.48 | 65.71 |
| GSMUA_Achr11P... | Banana | nucleus | 51.5 | 64.86 |
| CDY65526 | Canola | cytosol | 43.78 | 64.56 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 68.24 | 64.11 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 51.07 | 62.96 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 51.93 | 62.69 |
| Solyc02g071220.2.1 | Tomato | nucleus | 44.64 | 62.65 |
| PGSC0003DMT400007977 | Potato | nucleus | 43.35 | 61.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.36 | 61.0 |
| Zm00001d002982_P001 | Maize | cytosol, nucleus, plastid | 34.33 | 59.26 |
| GSMUA_Achr11P... | Banana | nucleus | 45.92 | 59.12 |
| KRH13391 | Soybean | nucleus | 45.06 | 58.66 |
| KRH20737 | Soybean | nucleus | 44.21 | 57.54 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 53.22 | 56.88 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 65.67 | 56.88 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 39.06 | 55.83 |
| KRH30056 | Soybean | nucleus | 44.21 | 55.08 |
| KRH62857 | Soybean | nucleus | 42.92 | 54.05 |
| CDX76036 | Canola | nucleus | 51.93 | 53.78 |
| CDY35419 | Canola | nucleus | 49.79 | 53.7 |
| Bra000224.1-P | Field mustard | nucleus | 49.79 | 53.7 |
| PGSC0003DMT400076758 | Potato | nucleus | 51.93 | 53.54 |
| CDX79942 | Canola | nucleus | 48.93 | 53.02 |
| CDY22518 | Canola | nucleus | 49.36 | 53.0 |
| Solyc10g079600.1.1 | Tomato | nucleus | 51.5 | 52.86 |
| Bra004615.1-P | Field mustard | nucleus | 48.5 | 52.8 |
| Bra016943.1-P | Field mustard | cytosol | 50.21 | 52.7 |
| CDY06934 | Canola | cytosol | 50.21 | 52.7 |
| Zm00001d019555_P002 | Maize | cytosol | 33.48 | 52.7 |
| CDY23856 | Canola | nucleus | 48.5 | 52.56 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 49.79 | 52.25 |
| PGSC0003DMT400076726 | Potato | nucleus | 50.64 | 52.21 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 48.93 | 51.82 |
| Bra014649.1-P | Field mustard | nucleus | 51.93 | 51.71 |
| CDX72077 | Canola | cytosol | 51.93 | 51.49 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 43.35 | 51.27 |
| AT2G41310.1 | Thale cress | nucleus | 49.36 | 51.11 |
| CDY30966 | Canola | cytosol | 50.64 | 50.86 |
| Bra007295.1-P | Field mustard | cytosol | 51.5 | 50.85 |
| KRH66808 | Soybean | nucleus | 54.08 | 50.81 |
| CDY06142 | Canola | cytosol | 51.07 | 50.42 |
| Zm00001d026594_P001 | Maize | cytosol | 34.33 | 50.31 |
| AT3G57040.1 | Thale cress | nucleus | 50.21 | 50.0 |
| Solyc10g079700.1.1 | Tomato | nucleus | 51.07 | 49.79 |
| KRG95133 | Soybean | nucleus | 52.36 | 49.59 |
| CDX67674 | Canola | cytosol | 49.79 | 49.57 |
| PGSC0003DMT400007618 | Potato | nucleus | 45.49 | 49.53 |
| Bra003265.1-P | Field mustard | cytosol | 50.64 | 49.17 |
| Zm00001d001865_P001 | Maize | plastid | 32.62 | 48.72 |
| Zm00001d032381_P001 | Maize | cytosol | 25.32 | 47.97 |
| Zm00001d050200_P001 | Maize | extracellular | 24.03 | 45.16 |
| Zm00001d052476_P001 | Maize | nucleus | 23.61 | 45.08 |
| KRH18706 | Soybean | nucleus | 40.34 | 44.13 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 43.35 | 43.53 |
| Zm00001d023242_P001 | Maize | nucleus | 25.75 | 43.17 |
| KRH64643 | Soybean | nucleus | 43.35 | 42.98 |
| KRH53261 | Soybean | nucleus | 42.06 | 42.24 |
| AT2G07440.1 | Thale cress | cytosol | 22.75 | 38.97 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 27.04 | 35.8 |
| Zm00001d017307_P001 | Maize | mitochondrion | 24.03 | 31.11 |
| Zm00001d050768_P003 | Maize | cytosol, endoplasmic reticulum, nucleus | 30.47 | 29.34 |
| Zm00001d025472_P002 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 24.46 | 23.75 |
| Zm00001d003598_P003 | Maize | nucleus | 30.47 | 22.33 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:541630 | ProteinID:AQK98126.1 | EMBL:BT060860 | UniProt:C0HEV4 |
| InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000156 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | InterPro:IPR001789 | EMBL:KJ727904 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF31 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00019487FD | EnsemblPlantsGene:Zm00001d011849 | EnsemblPlants:Zm00001d011849_P002 | EnsemblPlants:Zm00001d011849_T002 | SEG:seg |
Description
cytokinin response regulator4Two-component response regulator ARR9
Coordinates
chr8:-:162776064..162782027
Molecular Weight (calculated)
25379.1 Da
IEP (calculated)
6.045
GRAVY (calculated)
-0.519
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVLDAESRF HVLAVDDSII DRKLIEMLLK SSSYQVTTVD SGNKALELLG LRDNGAEDAS PPSSSSSSSS SSSPDHQEID VSLIITDYCM PGMTGYDLLK
101: RVKGSSSLKD IPVVIMSSEN VPARISRCLQ DGAEEFFLKP VKPADMKKLK SHLLKRKQPN QKNKPQAQAV ESPEQQLDPH PQPVHEPEEA AADRNGVNKR
201: KAAAMEEGLT VVVTAPESTK PRRLSTSSLT VET
101: RVKGSSSLKD IPVVIMSSEN VPARISRCLQ DGAEEFFLKP VKPADMKKLK SHLLKRKQPN QKNKPQAQAV ESPEQQLDPH PQPVHEPEEA AADRNGVNKR
201: KAAAMEEGLT VVVTAPESTK PRRLSTSSLT VET
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.