Factsheet for Zm00001d003598_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10856	Sorghum	plasma membrane	54.4	69.48
Os04t0442300-01	Rice	cytosol	45.91	63.2
TraesCS2D01G308000.1	Wheat	cytosol	41.82	60.45
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	41.82	60.45
GSMUA_Achr6P29050_001	Banana	nucleus	10.06	57.14
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.77	56.67
TraesCS2A01G309700.1	Wheat	cytosol	40.25	55.17
GSMUA_Achr3P16640_001	Banana	cytosol	29.87	53.67
Zm00001d002982_P001	Maize	cytosol, nucleus, plastid	22.01	51.85
GSMUA_Achr8P29210_001	Banana	nucleus	29.56	50.54
GSMUA_Achr6P29010_001	Banana	nucleus	29.56	50.54
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	16.35	46.43
Zm00001d050768_P003	Maize	cytosol, endoplasmic reticulum, nucleus	34.59	45.45
Zm00001d032381_P001	Maize	cytosol	17.3	44.72
Zm00001d019555_P002	Maize	cytosol	20.13	43.24
Zm00001d050200_P001	Maize	extracellular	16.35	41.94
Zm00001d026594_P001	Maize	cytosol	19.5	38.99
Zm00001d001865_P001	Maize	plastid	18.24	37.18
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	31.45	34.6
Zm00001d011849_P002	Maize	cytosol	22.33	30.47
Zm00001d017307_P001	Maize	mitochondrion	15.09	26.67
Zm00001d023242_P001	Maize	nucleus	11.32	25.9
Zm00001d052476_P001	Maize	nucleus	8.81	22.95

Protein Annotations

EntrezGene:100217235	MapMan:11.4.2.5	Gene3D:3.40.50.2300	UniProt:A0A1D6E9X4	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:IPR001789	ProteinID:ONM17198.1	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874
PANTHER:PTHR43874:SF28	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000844B924	EnsemblPlantsGene:Zm00001d003598
EnsemblPlants:Zm00001d003598_P003	EnsemblPlants:Zm00001d003598_T003	SEG:seg	:	:	:

Description

Two-component response regulator ARR16

Coordinates

chr2:+:49333085..49336119

Molecular Weight (calculated)

33784.5 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.263

Length

318 amino acids

Sequence
(BLAST)

001: MEAGGAGAEG VMRVLLVDDS PVDRRVAQLL LSSNSCAGSF HVIAVDSAKK AMEFLGLKDG GKEQAIDMVL TDYCMPEMTG YDLLKAIKAL NPLKPIPVIV
101: MSSEDEPQRI SRCLNAGAED FIVKPLQSKD VQRLRNCSTV GRPSNKGGAT LPCEENAVAK WSNNKLPPSA GAGAGASATS PSGRRANLAG VAMVRTHHVA
201: LPFPRTVRLK LNVSLTVTVT GCFSASARCC TRREWRSRST CRSCSSSSCW RTPRCAWASS CTDGRRVAAA RSPRGAPDQE GASSAKGQQR CKSPPGHRRQ
301: ETADAPSIIS EAPIALVF

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.