Factsheet for GSMUA_Achr6P29050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	69.64	34.82
GSMUA_Achr1P17800_001	Banana	cytosol	58.93	25.19
GSMUA_Achr10P...	Banana	nucleus	55.36	22.63
GSMUA_AchrUn_...	Banana	nucleus	53.57	21.74
GSMUA_Achr6P29010_001	Banana	nucleus	69.64	20.97
GSMUA_Achr3P16640_001	Banana	cytosol	66.07	20.9
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	51.79	20.57
GSMUA_Achr8P29210_001	Banana	nucleus	64.29	19.35
EES05247	Sorghum	cytosol	57.14	19.05
GSMUA_Achr11P...	Banana	nucleus	51.79	15.68
GSMUA_Achr5P08230_001	Banana	nucleus	53.57	15.54
GSMUA_Achr11P...	Banana	nucleus	50.0	15.47
GSMUA_Achr8P32360_001	Banana	cytosol	53.57	15.46
GSMUA_Achr3P08680_001	Banana	cytosol	51.79	15.34
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	57.14	15.31
TraesCS2D01G308000.1	Wheat	cytosol	58.93	15.0
GSMUA_AchrUn_...	Banana	nucleus	53.57	15.0
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	58.93	15.0
Os04t0442300-01	Rice	cytosol	58.93	14.29
GSMUA_Achr6P18540_001	Banana	nucleus	50.0	13.79
TraesCS2A01G309700.1	Wheat	cytosol	57.14	13.79
Zm00001d050768_P003	Maize	cytosol, endoplasmic reticulum, nucleus	57.14	13.22
KXG26371	Sorghum	cytosol, golgi, nucleus	53.57	13.16
EES10856	Sorghum	plasma membrane	57.14	12.85
Os02t0557800-01	Rice	cytosol, golgi, nucleus	55.36	12.3
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	58.93	11.42
Zm00001d003598_P003	Maize	nucleus	57.14	10.06
GSMUA_Achr8P09640_001	Banana	cytosol	30.36	9.66
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	32.14	7.5

Protein Annotations

EnsemblPlants:GSMUA_Achr6P29050_001	EnsemblPlants:GSMUA_Achr6T29050_001	EnsemblPlantsGene:GSMUA_Achr6G29050_001	Gene3D:3.40.50.2300	GO:GO:0000160	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:CheY-like_superfamily	InterPro:IPR001789	InterPro:Sig_transdc_resp-reg_receiver	PANTHER:PTHR43874	PANTHER:PTHR43874:SF3	PFscan:PS50110
SUPFAM:SSF52172	UniParc:UPI000294C718	UniProt:M0TB50	MapMan:35.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G29050_001]

Coordinates

chr6:+:29324814..29325340

Molecular Weight (calculated)

6344.8 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.229

Length

56 amino acids

Sequence
(BLAST)

1: MPEMTGYDLL KAVMEQSCQK PIPVIVMSSE NEPQRINSFL LEPRISSSNP SKLMTF

Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)

001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV

Arabidopsis Description

ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.