Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P08680_001 | Banana | cytosol | 84.97 | 86.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 87.05 | 84.0 |
| GSMUA_Achr11P... | Banana | nucleus | 74.09 | 77.3 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 56.99 | 75.34 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 54.4 | 75.0 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 46.63 | 73.17 |
| PGSC0003DMT400007977 | Potato | nucleus | 56.48 | 66.87 |
| GSMUA_Achr11P... | Banana | nucleus | 62.69 | 66.85 |
| Solyc02g071220.2.1 | Tomato | nucleus | 56.99 | 66.27 |
| CDY65526 | Canola | cytosol | 52.85 | 64.56 |
| KRH13391 | Soybean | nucleus | 59.59 | 64.25 |
| KRH20737 | Soybean | nucleus | 59.07 | 63.69 |
| KRH30056 | Soybean | nucleus | 59.59 | 61.5 |
| KRH62857 | Soybean | nucleus | 57.51 | 60.0 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 50.26 | 59.51 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 66.32 | 58.72 |
| GSMUA_Achr10P... | Banana | nucleus | 40.93 | 57.66 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 41.97 | 57.45 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 38.34 | 56.49 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 57.51 | 56.35 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 62.69 | 55.0 |
| PGSC0003DMT400076758 | Potato | nucleus | 63.73 | 54.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.86 | 54.35 |
| PGSC0003DMT400007618 | Potato | nucleus | 60.1 | 54.21 |
| PGSC0003DMT400076726 | Potato | nucleus | 63.21 | 53.98 |
| Os01t0952500-01 | Rice | cytosol | 64.77 | 53.88 |
| Solyc10g079600.1.1 | Tomato | nucleus | 63.21 | 53.74 |
| GSMUA_Achr6P29050_001 | Banana | nucleus | 15.54 | 53.57 |
| KRG95133 | Soybean | nucleus | 66.32 | 52.03 |
| Zm00001d011849_P002 | Maize | cytosol | 62.69 | 51.93 |
| CDY35419 | Canola | nucleus | 58.03 | 51.85 |
| Bra000224.1-P | Field mustard | nucleus | 58.03 | 51.85 |
| Solyc10g079700.1.1 | Tomato | nucleus | 63.73 | 51.46 |
| CDY06934 | Canola | cytosol | 58.55 | 50.9 |
| Bra016943.1-P | Field mustard | cytosol | 58.55 | 50.9 |
| KRH66808 | Soybean | nucleus | 65.28 | 50.81 |
| CDY23856 | Canola | nucleus | 56.48 | 50.7 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 58.03 | 50.45 |
| CDX79942 | Canola | nucleus | 55.96 | 50.23 |
| CDY22518 | Canola | nucleus | 56.48 | 50.23 |
| EES02064 | Sorghum | cytosol | 63.73 | 50.2 |
| Bra004615.1-P | Field mustard | nucleus | 55.44 | 50.0 |
| AT2G41310.1 | Thale cress | nucleus | 57.51 | 49.33 |
| CDX76036 | Canola | nucleus | 56.48 | 48.44 |
| AT3G57040.1 | Thale cress | nucleus | 58.55 | 48.29 |
| CDX67674 | Canola | cytosol | 58.03 | 47.86 |
| CDX72077 | Canola | cytosol | 58.03 | 47.66 |
| Bra007295.1-P | Field mustard | cytosol | 58.03 | 47.46 |
| CDY06142 | Canola | cytosol | 58.03 | 47.46 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 58.55 | 47.08 |
| CDY30966 | Canola | cytosol | 56.48 | 46.98 |
| Bra003265.1-P | Field mustard | cytosol | 58.03 | 46.67 |
| Bra014649.1-P | Field mustard | nucleus | 56.48 | 46.58 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 59.59 | 46.37 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 53.37 | 44.4 |
| GSMUA_Achr6P29010_001 | Banana | nucleus | 42.49 | 44.09 |
| KRH64643 | Soybean | nucleus | 52.85 | 43.4 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 31.61 | 43.26 |
| KRH18706 | Soybean | nucleus | 47.67 | 43.19 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 39.38 | 43.18 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 60.1 | 43.12 |
| GSMUA_Achr3P16640_001 | Banana | cytosol | 39.38 | 42.94 |
| KRH53261 | Soybean | nucleus | 51.3 | 42.67 |
| GSMUA_Achr8P32360_001 | Banana | cytosol | 42.49 | 42.27 |
| GSMUA_Achr6P29030_001 | Banana | cytosol, nucleus, plastid | 23.83 | 41.07 |
| GSMUA_Achr8P29210_001 | Banana | nucleus | 39.38 | 40.86 |
| GSMUA_Achr6P18540_001 | Banana | nucleus | 39.9 | 37.93 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 40.93 | 37.8 |
| AT2G07440.1 | Thale cress | cytosol | 25.39 | 36.03 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G08230_001 |
| EnsemblPlants:GSMUA_Achr5P08230_001 | EnsemblPlants:GSMUA_Achr5T08230_001 | InterPro:IPR001789 | UniProt:M0SWQ2 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00029631EC |
| SEG:seg | : | : | : | : | : |
Description
Two-component response regulator ARR9 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08230_001]
Coordinates
chr5:+:5965616..5967602
Molecular Weight (calculated)
21366.7 Da
IEP (calculated)
5.782
GRAVY (calculated)
-0.366
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDAEAQFH VLAVDDSLMD RKLIERLLKT SSFQVTTVDS GSKALEVLGL SEDQTSPSAV SPEHNEIEVN LVITDYCMPG MTGYDLLKKI KGSSSLKDIP
101: VVVMSSENVP SRINRCLEGG AEEFFLKPVQ LSDMKRLRPH ILKGRSKDQQ LQREENSNTI IISSGGSKRK AMDEEPSPER TRLRFSTGSL TIL
101: VVVMSSENVP SRINRCLEGG AEEFFLKPVQ LSDMKRLRPH ILKGRSKDQQ LQREENSNTI IISSGGSKRK AMDEEPSPER TRLRFSTGSL TIL
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.