Factsheet for GSMUA_Achr8P29210_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P16640_001	Banana	cytosol	79.03	83.05
GSMUA_Achr6P29010_001	Banana	nucleus	76.34	76.34
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	41.4	68.75
GSMUA_Achr6P29050_001	Banana	nucleus	19.35	64.29
GSMUA_Achr8P32360_001	Banana	cytosol	59.68	57.22
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	41.94	55.32
GSMUA_Achr6P18540_001	Banana	nucleus	56.99	52.22
GSMUA_Achr1P17800_001	Banana	cytosol	35.48	50.38
EES05247	Sorghum	cytosol	45.16	50.0
GSMUA_Achr10P...	Banana	nucleus	36.56	49.63
GSMUA_AchrUn_...	Banana	nucleus	36.02	48.55
TraesCS2D01G308000.1	Wheat	cytosol	52.15	44.09
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	51.08	43.18
GSMUA_Achr3P08680_001	Banana	cytosol	43.55	42.86
GSMUA_Achr11P...	Banana	nucleus	41.4	41.62
Os04t0442300-01	Rice	cytosol	50.54	40.69
GSMUA_AchrUn_...	Banana	nucleus	42.47	39.5
GSMUA_Achr5P08230_001	Banana	nucleus	40.86	39.38
KXG26371	Sorghum	cytosol, golgi, nucleus	47.85	39.04
TraesCS2A01G309700.1	Wheat	cytosol	48.39	38.79
EES10856	Sorghum	plasma membrane	51.08	38.15
Zm00001d050768_P003	Maize	cytosol, endoplasmic reticulum, nucleus	49.46	38.02
GSMUA_Achr11P...	Banana	nucleus	36.02	37.02
Os02t0557800-01	Rice	cytosol, golgi, nucleus	50.0	36.9
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	38.17	33.97
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	39.25	30.42
Zm00001d003598_P003	Maize	nucleus	50.54	29.56
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	41.4	26.64
GSMUA_Achr8P09640_001	Banana	cytosol	21.51	22.73

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G29210_001
EnsemblPlants:GSMUA_Achr8P29210_001	EnsemblPlants:GSMUA_Achr8T29210_001	InterPro:IPR001789	UniProt:M0TUM4	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF3	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002962902
SEG:seg	:	:	:	:	:

Description

Receptor histidine kinase, putative [Source:GMGC_GENE;Acc:GSMUA_Achr8G29210_001]

Coordinates

chr8:+:31696012..31699186

Molecular Weight (calculated)

20630.0 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.389

Length

186 amino acids

Sequence
(BLAST)

001: MEEGEGSNGG VFEGGLEVRV LVVDDSPVER RMVEGLLKKS GAMFQVIAVD SGKRAMEVLG LTDDKAEQPT VDDQKVDIIL TDYSMPEMTG YDLLKTVKEQ
101: SCRKPIPVII MSSENEPQRI SRCRAIGAED FILKPLQTND VLRLRSYARP VELSPRTGTK RKMTLELMAE NSSSDRRPRL TGLAVS

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.