Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P32360_001 | Banana | cytosol | 73.05 | 53.09 |
| GSMUA_Achr6P29050_001 | Banana | nucleus | 20.57 | 51.79 |
| GSMUA_Achr3P16640_001 | Banana | cytosol | 55.32 | 44.07 |
| GSMUA_Achr10P... | Banana | nucleus | 41.13 | 42.34 |
| GSMUA_Achr8P29210_001 | Banana | nucleus | 55.32 | 41.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.72 | 40.58 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 37.59 | 40.46 |
| GSMUA_Achr6P18540_001 | Banana | nucleus | 57.45 | 39.9 |
| GSMUA_Achr6P29010_001 | Banana | nucleus | 51.06 | 38.71 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 43.26 | 32.28 |
| GSMUA_Achr11P... | Banana | nucleus | 41.13 | 32.04 |
| GSMUA_Achr11P... | Banana | nucleus | 41.84 | 31.89 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 43.26 | 31.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.97 | 31.0 |
| GSMUA_Achr6P29030_001 | Banana | cytosol, nucleus, plastid | 21.99 | 27.68 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 37.59 | 25.36 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 17.02 | 13.64 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG12610_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP12610_001 | EnsemblPlants:GSMUA_AchrUn_randomT12610_001 | InterPro:IPR001789 | UniProt:M0U8M0 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF3 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0002958102 |
| SEG:seg | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12610_001]
Coordinates
chrchrUn_random:+:60490121..60492532
Molecular Weight (calculated)
15378.6 Da
IEP (calculated)
4.535
GRAVY (calculated)
-0.101
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQVKKAGE EVDTIGGGGG EAVRVLVVDD SPSDRKIVEM LLKNSGGLFE VIAVESGEKA MEVLGLNGVT ALLNDKNIDV ILTDYCMPQM TGYDLLKAVK
101: EHSSYPSIPV VMMSSENDPQ RISRHSLVTF MNYFKSSGCK F
101: EHSSYPSIPV VMMSSENDPQ RISRHSLVTF MNYFKSSGCK F
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.