Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16640_001 | Banana | cytosol | 52.71 | 60.45 |
| GSMUA_Achr8P32360_001 | Banana | cytosol | 57.14 | 59.79 |
| GSMUA_Achr6P29010_001 | Banana | nucleus | 53.2 | 58.06 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 39.9 | 57.45 |
| GSMUA_Achr8P29210_001 | Banana | nucleus | 52.22 | 56.99 |
| GSMUA_Achr6P29050_001 | Banana | nucleus | 13.79 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 33.0 | 48.91 |
| GSMUA_Achr1P17800_001 | Banana | cytosol | 31.03 | 48.09 |
| GSMUA_Achr6P29030_001 | Banana | cytosol, nucleus, plastid | 26.11 | 47.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.02 | 47.1 |
| GSMUA_Achr11P... | Banana | nucleus | 37.44 | 41.08 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 37.93 | 40.74 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 37.93 | 39.9 |
| GSMUA_Achr11P... | Banana | nucleus | 34.48 | 38.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.93 | 38.5 |
| GSMUA_Achr1P07020_001 | Banana | mitochondrion, plastid | 33.0 | 32.06 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 20.69 | 23.86 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G18540_001 |
| EnsemblPlants:GSMUA_Achr6P18540_001 | EnsemblPlants:GSMUA_Achr6T18540_001 | InterPro:IPR001789 | UniProt:M0T852 | PFAM:PF00072 | PFscan:PS50110 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF3 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI000294A967 |
| SEG:seg | : | : | : | : | : |
Description
Receptor histidine kinase, putative [Source:GMGC_GENE;Acc:GSMUA_Achr6G18540_001]
Coordinates
chr6:+:12795652..12799317
Molecular Weight (calculated)
22103.9 Da
IEP (calculated)
6.015
GRAVY (calculated)
-0.044
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVNDCGGGG LEVVRVLVVD DSPVDRKIVE MLLRRSEGIF DVVSVDSGKK AMEVLGLNEI EAKPPNHDDQ KIDIVLTDYC MPEMTGLDLL KAVKANSSSR
101: SIPVVMMSSE NDSERISSCR AIGAEDFILK PLQVKDVQRL RTYTVPIGPM SKRGSKRKLP MALIAESNGA EARPLLAKVA AFGSAVFLTL NFWRSSVMSS
201: SCN
101: SIPVVMMSSE NDSERISSCR AIGAEDFILK PLQVKDVQRL RTYTVPIGPM SKRGSKRKLP MALIAESNGA EARPLLAKVA AFGSAVFLTL NFWRSSVMSS
201: SCN
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.