Factsheet for Zm00001d050768_P003

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05247	Sorghum	cytosol	59.92	86.31
Os02t0557800-01	Rice	cytosol, golgi, nucleus	66.94	64.29
GSMUA_Achr6P29050_001	Banana	nucleus	13.22	57.14
GSMUA_Achr3P16640_001	Banana	cytosol	38.43	52.54
Zm00001d002982_P001	Maize	cytosol, nucleus, plastid	28.93	51.85
GSMUA_Achr8P29210_001	Banana	nucleus	38.02	49.46
GSMUA_Achr6P29010_001	Banana	nucleus	37.19	48.39
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	45.87	46.25
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	20.25	43.75
Zm00001d032381_P001	Maize	cytosol	21.9	43.09
Zm00001d019555_P002	Maize	cytosol	26.03	42.57
Zm00001d050200_P001	Maize	extracellular	20.25	39.52
Zm00001d026594_P001	Maize	cytosol	25.62	38.99
Zm00001d001865_P001	Maize	plastid	23.97	37.18
Zm00001d003598_P003	Maize	nucleus	45.45	34.59
Zm00001d011849_P002	Maize	cytosol	29.34	30.47
Zm00001d023242_P001	Maize	nucleus	16.53	28.78
Zm00001d017307_P001	Maize	mitochondrion	20.25	27.22
Zm00001d052476_P001	Maize	nucleus	13.22	26.23

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	ProteinID:AQK53037.1	UniProt:B4FKP5	EMBL:BT037683	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009735
GO:GO:0009987	InterPro:IPR001789	EMBL:KJ727912	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874
PANTHER:PTHR43874:SF3	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI00017B69EA	EnsemblPlantsGene:Zm00001d050768
EnsemblPlants:Zm00001d050768_P003	EnsemblPlants:Zm00001d050768_T003	SEG:seg	:	:	:

Description

cytokinin response regulator7Two-component response regulator ARR16

Coordinates

chr4:+:121766673..121769040

Molecular Weight (calculated)

26551.1 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.131

Length

242 amino acids

Sequence
(BLAST)

001: MGQGGEVKAA PAVRVLVVDD SPVDRKVVEL LLRNHNHQGG AAPFHVTAVD SGKKAMEHLR LMEQGGQLDS CAADANRITI DIVLTDYCMP EMTGYDLLKA
101: IKALSSPNPI PVVVMSSENE PQRISRCLTA GAEDFILKPL KTKDVQRLRN CSSAARPRDD AAHQCESLRR SSRKLRSDQV AAPGHRSQPT TGLTMVLHAS
201: SIELSHYFQF LLKFVLLAYA VLCLTELLHR WSNGSVLSLW SA

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.