Factsheet for Zm00001d025472_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26371	Sorghum	cytosol, golgi, nucleus	68.75	72.37
Os04t0442300-01	Rice	cytosol	56.67	58.87
TraesCS2D01G308000.1	Wheat	cytosol	50.42	55.0
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	48.75	53.18
TraesCS2A01G309700.1	Wheat	cytosol	48.33	50.0
Zm00001d050768_P003	Maize	cytosol, endoplasmic reticulum, nucleus	46.25	45.87
Zm00001d003598_P003	Maize	nucleus	56.67	42.77
GSMUA_Achr3P16640_001	Banana	cytosol	31.25	42.37
GSMUA_Achr6P29010_001	Banana	nucleus	30.42	39.25
GSMUA_Achr8P29210_001	Banana	nucleus	30.42	39.25
Zm00001d002982_P001	Maize	cytosol, nucleus, plastid	21.67	38.52
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	15.83	33.93
GSMUA_Achr6P29050_001	Banana	nucleus	7.5	32.14
Zm00001d032381_P001	Maize	cytosol	16.25	31.71
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	37.92	31.49
Zm00001d026594_P001	Maize	cytosol	20.42	30.82
Zm00001d019555_P002	Maize	cytosol	18.75	30.41
Zm00001d050200_P001	Maize	extracellular	15.42	29.84
Zm00001d001865_P001	Maize	plastid	18.75	28.85
Zm00001d017307_P001	Maize	mitochondrion	19.58	26.11
Zm00001d011849_P002	Maize	cytosol	23.75	24.46
Zm00001d023242_P001	Maize	nucleus	14.17	24.46
Zm00001d052476_P001	Maize	nucleus	9.58	18.85

Protein Annotations

EntrezGene:100272408	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A1D6J7C3	ProteinID:AQK43822.1	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF28
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000842FCB3	EnsemblPlantsGene:Zm00001d025472	EnsemblPlants:Zm00001d025472_P002	EnsemblPlants:Zm00001d025472_T002
SEG:seg	:	:	:	:	:

Description

Two-component response regulator ARR16

Coordinates

chr10:-:119894517..119896773

Molecular Weight (calculated)

25331.7 Da

IEP (calculated)

8.155

GRAVY (calculated)

0.082

Length

240 amino acids

Sequence
(BLAST)

001: MEAAAGGVEA EGVMRVLVVD DSPVDRRVAQ LLLSSDSCAG SFHVIAVDSA RKAMEFLGLK DGGEALNPLE PIPVVVMSSE DEPQRISRRG QKPWPVCTDG
101: VTFIHSSTRP VCTDGLVILR SRCLSAGAED FIVKPLQSKD VQRLRNCSAA ARPSKGAAPC EAAVVAKRNQ KPPHPAGAAS PSGRRASLAG VAMVLHSSGV
201: EYLPLLLKLV VLAYAALCLG ELLHRWASSD GRCSLSPWCA

Best Arabidopsis Sequence Match ( AT5G62920.1 )
(BLAST)

001: MAEVMLPRKM EILNHSSKFG SPDPLHVLAV DDSHVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDVEE KSVGFEDLKV NLIMTDYSMP GMTGYELLKK
101: IKESSAFREV PVVIMSSENI LPRIDRCLEE GAEDFLLKPV KLSDVKRLRD SLMKVEDLSF TKSIQKRELE TENVYPVHSQ LKRAKI

Arabidopsis Description

ARR6Response regulator 6 [Source:UniProtKB/TrEMBL;Acc:Q0WSS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.