CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10856	Sorghum	plasma membrane	92.54	84.74
Os04t0442300-01	Rice	cytosol	71.93	71.0
Zm00001d025472_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	72.37	68.75
TraesCS2D01G308000.1	Wheat	cytosol	65.35	67.73
TraesCS2B01G326800.2	Wheat	cytosol, endoplasmic reticulum, nucleus	64.47	66.82
TraesCS2A01G309700.1	Wheat	cytosol	64.04	62.93
EES05247	Sorghum	cytosol	40.79	55.36
GSMUA_Achr6P29050_001	Banana	nucleus	13.16	53.57
GSMUA_Achr3P16640_001	Banana	cytosol	39.91	51.41
EES12531	Sorghum	nucleus	28.95	49.25
GSMUA_Achr6P29010_001	Banana	nucleus	39.04	47.85
GSMUA_Achr8P29210_001	Banana	nucleus	39.04	47.85
EER99112	Sorghum	cytosol	24.56	45.53
EES14894	Sorghum	cytosol	24.12	44.72
OQU86020	Sorghum	plastid	27.19	42.47
GSMUA_Achr6P29030_001	Banana	cytosol, nucleus, plastid	20.61	41.96
EES07188	Sorghum	plastid	27.63	41.72
HORVU2Hr1G077000.3	Barley	golgi, mitochondrion, plasma membrane, plastid	52.19	41.18
EER96309	Sorghum	cytosol	26.32	35.71
EES11637	Sorghum	plastid	25.88	34.71
OQU80317	Sorghum	cytosol	19.74	31.91
KXG27703	Sorghum	nucleus	27.63	31.19
EES02064	Sorghum	cytosol	30.26	28.16
KXG22820	Sorghum	endoplasmic reticulum	28.95	23.66

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	UniProt:A0A1B6PL28	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:IPR001789	EnsemblPlants:KXG26371	ProteinID:KXG26371	ProteinID:KXG26371.1	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF28	SMART:SM00448	EnsemblPlantsGene:SORBI_3006G090400	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
UniParc:UPI00081ACF3E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:46045158..46049223

Molecular Weight (calculated)

24562.1 Da

IEP (calculated)

7.981

GRAVY (calculated)

0.115

Length

228 amino acids

Sequence
(BLAST)

001: MEAAGVVEVE EGVMRVLLVD DSPVDRRVAQ LLLSSNSCAG SFHVIAVDSA KKAMEFLGLK DGGGKEQTID MVLTDYCMPE MTGYDLLRAI KALNPLKPIP
101: VIVMSSEDEP QRISRCLNAG AEDYIVKPLQ SKDVQRLRNC STAAAVVAKR NNNKPPLVLP PSSSAAATSP SSGRRAAMVL HSSSVELSQY LPLLLKLVVL
201: LCAVLCLGEL LHRWSSSCGR CSLSPWRA

Best Arabidopsis Sequence Match ( AT1G59940.1 )
(BLAST)

001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A

Arabidopsis Description

ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.