CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002982_P001	Maize	cytosol, nucleus, plastid	95.52	94.81
TraesCS2D01G374300.1	Wheat	cytosol	89.55	88.89
TraesCS2B01G394900.1	Wheat	cytosol	89.55	88.89
TraesCS2A01G377900.1	Wheat	cytosol	89.55	88.89
Os04t0524300-01	Rice	cytosol, mitochondrion, nucleus, plastid	88.81	88.81
HORVU2Hr1G090270.1	Barley	plastid	88.06	87.41
GSMUA_Achr1P17800_001	Banana	cytosol	76.12	77.86
GSMUA_Achr10P...	Banana	nucleus	76.12	74.45
EES07188	Sorghum	plastid	83.58	74.17
GSMUA_AchrUn_...	Banana	nucleus	75.37	73.19
OQU86020	Sorghum	plastid	67.91	62.33
EES11637	Sorghum	plastid	74.63	58.82
EER96309	Sorghum	cytosol	73.13	58.33
EES14894	Sorghum	cytosol	45.52	49.59
EER99112	Sorghum	cytosol	45.52	49.59
GSMUA_Achr1P07020_001	Banana	mitochondrion, plastid	76.87	49.28
EES05247	Sorghum	cytosol	52.24	41.67
KXG27703	Sorghum	nucleus	58.96	39.11
HORVU6Hr1G059200.1	Barley	cytosol, plastid	55.97	39.06
OQU80317	Sorghum	cytosol	38.06	36.17
EES02064	Sorghum	cytosol	60.45	33.06
KXG26371	Sorghum	cytosol, golgi, nucleus	49.25	28.95
EES10856	Sorghum	plasma membrane	52.24	28.11
KXG22820	Sorghum	endoplasmic reticulum	58.21	27.96

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EntrezGene:8056021	UniProt:C5YCG0	InterPro:CheY-like_superfamily	EnsemblPlants:EES12531
ProteinID:EES12531	ProteinID:EES12531.1	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:IPR001789	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF22
SMART:SM00448	EnsemblPlantsGene:SORBI_3006G151800	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0001A873B7	RefSeq:XP_002448203.1

Description

hypothetical protein

Coordinates

chr6:-:51253987..51255100

Molecular Weight (calculated)

14683.8 Da

IEP (calculated)

7.420

GRAVY (calculated)

-0.090

Length

134 amino acids

Sequence
(BLAST)

001: MASRTGSLGG EGSAPHVLAV DDSSVDRAVI AGILRSSHFR VTAVDSGKRA LELLGTEPNV SMIITDYWMP EMTGYELLKK VKESSRLKEI PVVIMSSENV
101: PTRINRCLEE GAEDFLLKPV RPADVSRLCS RVLR

Best Arabidopsis Sequence Match ( AT1G10470.3 )
(BLAST)

001: MMSVGGIGGI ESAPLDLDEV HVLAVDDSLV DRIVIERLLR ITSCKVTAVD SGWRALEFLG LDNEKASAEF DRLKVDLIIT DYCMPGMTGY ELLKKIKESS
101: NFREVPVVIM SSENVLTRID RCLEEGAQDF LLKPVKLADV KRLRSHLTKD VKLSNGNKRK LPEDSSSVNS SLPPPSPPLT ISPESSPPLT VSTESSDSSP
201: PLSPVEIFST SPLSSPIDDE DDDVLTSSSE ESPIRRQKMR SPGLD

Arabidopsis Description

ARR4Two-component response regulator ARR4 [Source:UniProtKB/Swiss-Prot;Acc:O82798]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.