Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004615.1-P | Field mustard | nucleus | 98.6 | 99.07 |
| CDY23856 | Canola | nucleus | 96.28 | 96.28 |
| CDY35419 | Canola | nucleus | 85.58 | 85.19 |
| CDY22518 | Canola | nucleus | 85.12 | 84.33 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 85.12 | 82.43 |
| CDY06934 | Canola | cytosol | 84.19 | 81.53 |
| AT2G07440.1 | Thale cress | cytosol | 50.23 | 79.41 |
| CDY65526 | Canola | cytosol | 56.28 | 76.58 |
| CDX76036 | Canola | nucleus | 69.77 | 66.67 |
| CDY30966 | Canola | cytosol | 71.16 | 65.95 |
| CDX72077 | Canola | cytosol | 70.7 | 64.68 |
| CDX67674 | Canola | cytosol | 69.77 | 64.1 |
| CDY06142 | Canola | cytosol | 69.3 | 63.14 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 61.86 | 61.01 |
| PGSC0003DMT400076758 | Potato | nucleus | 63.26 | 60.18 |
| Solyc10g079600.1.1 | Tomato | nucleus | 62.33 | 59.03 |
| PGSC0003DMT400076726 | Potato | nucleus | 61.86 | 58.85 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 50.7 | 57.67 |
| PGSC0003DMT400007618 | Potato | nucleus | 57.21 | 57.48 |
| Os12t0139400-01 | Rice | nucleus | 53.49 | 57.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.02 | 57.0 |
| GSMUA_Achr11P... | Banana | nucleus | 48.84 | 56.76 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 37.21 | 56.74 |
| GSMUA_Achr11P... | Banana | nucleus | 47.44 | 56.35 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 50.23 | 55.96 |
| Os11t0143300-02 | Rice | cytosol | 53.49 | 55.29 |
| KRH66808 | Soybean | nucleus | 63.72 | 55.24 |
| Solyc10g079700.1.1 | Tomato | nucleus | 61.4 | 55.23 |
| KRG95133 | Soybean | nucleus | 61.86 | 54.06 |
| KXG27703 | Sorghum | nucleus | 49.3 | 52.48 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 42.79 | 51.4 |
| CDY71200 | Canola | cytosol | 30.23 | 51.18 |
| CDY59626 | Canola | cytosol | 30.23 | 51.18 |
| CDX75990 | Canola | cytosol | 30.23 | 51.18 |
| Os01t0952500-01 | Rice | cytosol | 54.88 | 50.86 |
| CDX72141 | Canola | cytosol | 29.77 | 50.39 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 42.79 | 50.27 |
| CDY36905 | Canola | nucleus | 42.79 | 50.27 |
| CDY70164 | Canola | nucleus | 42.79 | 50.27 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 42.79 | 50.0 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 42.33 | 49.73 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 53.02 | 49.35 |
| Zm00001d011849_P002 | Maize | cytosol | 53.02 | 48.93 |
| CDY22469 | Canola | cytosol | 35.81 | 48.73 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 52.56 | 48.71 |
| EES02064 | Sorghum | cytosol | 55.35 | 48.57 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 39.53 | 48.02 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 53.02 | 47.5 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 52.56 | 47.48 |
| CDY35445 | Canola | cytosol | 35.35 | 47.2 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 40.0 | 46.74 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 53.49 | 46.37 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 52.09 | 45.9 |
| CDX84366 | Canola | nucleus | 40.47 | 45.79 |
| CDY00336 | Canola | nucleus | 40.47 | 45.79 |
| CDX96681 | Canola | cytosol | 42.79 | 44.44 |
| Zm00001d023242_P001 | Maize | nucleus | 28.37 | 43.88 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 34.42 | 43.79 |
| CDX83788 | Canola | cytosol | 42.79 | 43.4 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 53.02 | 42.38 |
| CDY26701 | Canola | nucleus | 41.86 | 42.25 |
| CDX68161 | Canola | cytosol | 38.6 | 42.13 |
| CDY41014 | Canola | nucleus | 41.4 | 41.59 |
| CDY45155 | Canola | nucleus | 43.72 | 41.23 |
| Zm00001d052476_P001 | Maize | nucleus | 23.26 | 40.98 |
| CDY30913 | Canola | nucleus | 43.72 | 39.5 |
| CDY20630 | Canola | nucleus | 44.65 | 38.87 |
| CDY20948 | Canola | nucleus | 44.65 | 37.94 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 38.14 | 37.61 |
| CDY37975 | Canola | nucleus | 44.19 | 37.55 |
| CDY34890 | Canola | nucleus | 45.12 | 37.31 |
| KXG22820 | Sorghum | endoplasmic reticulum | 48.37 | 37.28 |
| CDX93424 | Canola | nucleus | 43.72 | 37.15 |
| CDY66046 | Canola | nucleus | 43.26 | 36.76 |
| CDY07801 | Canola | nucleus | 45.12 | 36.6 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 26.51 | 32.39 |
Protein Annotations
| EnsemblPlants:CDX79942 | EnsemblPlantsGene:GSBRNA2T00132801001 | Gene3D:3.40.50.2300 | GO:A0A078CT56 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX79942 | ProteinID:CDX79942.1 |
| SEG:seg | SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EF0425 | MapMan:11.4.2.5 | : |
Description
BnaA05g02140D
Coordinates
chrLK031819:-:950662..951647
Molecular Weight (calculated)
24306.3 Da
IEP (calculated)
4.857
GRAVY (calculated)
-0.481
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMVRESQFH VLAVDDSQLD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RESNDPNSLE THQQEVEINL IITDYCMPGM TGYDLLKKVK ESAAFRSIPV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVKL ADVTKLKPHM MKTKLKKEGE KVGEEENATS KPEESLVVEM ILPLNQELEL EQQEPMLSSN KRKAMEEVIS
201: ADRSRPKYND ITTSV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVKL ADVTKLKPHM MKTKLKKEGE KVGEEENATS KPEESLVVEM ILPLNQELEL EQQEPMLSSN KRKAMEEVIS
201: ADRSRPKYND ITTSV
001: MMARDVKWES AAFRSIHVVI MSSENVPTRI SRCLEKGAEE FFLKPVKLVD HTKLKPHMMK TKLKKESEKP VAIEEIVVSK PEIEEESLVI DILPLHQEVE
101: SEQLEPMLSS NKRKAMEEVI STDRPRPKYN DITTSV
101: SEQLEPMLSS NKRKAMEEVI STDRPRPKYN DITTSV
Arabidopsis Description
Putative two-component response regulator protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.