Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033773.1-P | Field mustard | nucleus | 98.36 | 100.0 |
| AT3G48100.1 | Thale cress | cytosol | 97.27 | 96.74 |
| CDY36905 | Canola | nucleus | 95.08 | 95.08 |
| CDY70164 | Canola | nucleus | 95.08 | 95.08 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 92.9 | 94.97 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 93.44 | 92.93 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 92.35 | 92.35 |
| CDX84366 | Canola | nucleus | 75.41 | 72.63 |
| CDY00336 | Canola | nucleus | 75.41 | 72.63 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 62.3 | 64.41 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 63.39 | 63.04 |
| CDX68161 | Canola | cytosol | 62.84 | 58.38 |
| KRH03376 | Soybean | nucleus | 65.03 | 57.49 |
| KRH57009 | Soybean | nucleus | 66.12 | 57.35 |
| Solyc03g113720.2.1 | Tomato | nucleus | 60.66 | 56.92 |
| CDX96681 | Canola | cytosol | 63.39 | 56.04 |
| CDY26701 | Canola | nucleus | 65.03 | 55.87 |
| CDY41014 | Canola | nucleus | 65.03 | 55.61 |
| PGSC0003DMT400063187 | Potato | cytosol | 60.66 | 55.5 |
| CDX83788 | Canola | cytosol | 63.39 | 54.72 |
| KRH63457 | Soybean | cytosol | 60.66 | 54.41 |
| CDY65526 | Canola | cytosol | 45.36 | 52.53 |
| KRH54462 | Soybean | cytosol | 58.47 | 52.45 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 62.3 | 52.29 |
| CDX72141 | Canola | cytosol | 35.52 | 51.18 |
| CDY59626 | Canola | cytosol | 34.97 | 50.39 |
| CDY71200 | Canola | cytosol | 34.97 | 50.39 |
| CDY35445 | Canola | cytosol | 44.26 | 50.31 |
| CDY22469 | Canola | cytosol | 43.17 | 50.0 |
| CDX75990 | Canola | cytosol | 34.43 | 49.61 |
| CDY45155 | Canola | nucleus | 59.02 | 47.37 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 66.12 | 46.9 |
| CDY30913 | Canola | nucleus | 59.02 | 45.38 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 40.98 | 44.38 |
| CDY20630 | Canola | nucleus | 58.47 | 43.32 |
| CDX79942 | Canola | nucleus | 50.27 | 42.79 |
| CDY20948 | Canola | nucleus | 59.02 | 42.69 |
| CDY23856 | Canola | nucleus | 49.73 | 42.33 |
| CDY22518 | Canola | nucleus | 49.73 | 41.94 |
| CDY37975 | Canola | nucleus | 57.92 | 41.9 |
| CDY35419 | Canola | nucleus | 49.18 | 41.67 |
| CDY34890 | Canola | nucleus | 58.47 | 41.15 |
| CDY66046 | Canola | nucleus | 56.83 | 41.11 |
| CDX93424 | Canola | nucleus | 56.83 | 41.11 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 49.73 | 40.99 |
| CDY06934 | Canola | cytosol | 49.18 | 40.54 |
| CDY07801 | Canola | nucleus | 58.47 | 40.38 |
| CDX67674 | Canola | cytosol | 48.09 | 37.61 |
| CDX76036 | Canola | nucleus | 45.36 | 36.89 |
| CDY06142 | Canola | cytosol | 47.54 | 36.86 |
| CDX72077 | Canola | cytosol | 46.99 | 36.6 |
| CDY30966 | Canola | cytosol | 44.81 | 35.34 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078IW81 | UniProt:A0A078IW81 | EnsemblPlants:CDY54257 | ProteinID:CDY54257 |
| ProteinID:CDY54257.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00013721001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EEF15F | : | : | : | : |
Description
BnaC01g42890DBnaC01g42890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW81]
Coordinates
chrLK033296:-:20509..22583
Molecular Weight (calculated)
20762.4 Da
IEP (calculated)
5.414
GRAVY (calculated)
-0.152
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVLRPEML DISNDTSSLA SPELLHVLAV DDSIVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGDN SSVGFQDLKI NLIMTDYSMP GMTGYELLKK
101: IKESSAFREI PVVIMSSENI LPRIDRCLEE GAEDFLLKPV KLADVKRLRD SLMKAEERVF KNIMHKRELE ANDIYSQLKR AKI
101: IKESSAFREI PVVIMSSENI LPRIDRCLEE GAEDFLLKPV KLADVKRLRD SLMKAEERVF KNIMHKRELE ANDIYSQLKR AKI
001: MAEVLRPEML DISNDTSSLA SPKLLHVLAV DDSMVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGEN NSSVGFEDLK INLIMTDYSM PGMTGYELLK
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI
Arabidopsis Description
ARR5Response reactor 2 [Source:UniProtKB/TrEMBL;Acc:Q0WW39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.