Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61745 | Canola | cytosol | 99.24 | 99.24 |
| Bra002984.1-P | Field mustard | cytosol | 98.47 | 98.47 |
| CDY28767 | Canola | cytosol | 88.55 | 88.55 |
| CDY48640 | Canola | cytosol | 87.79 | 87.79 |
| CDY29293 | Canola | cytosol | 79.39 | 81.89 |
| AT5G54490.1 | Thale cress | cytosol | 78.63 | 81.1 |
| PGSC0003DMT400064403 | Potato | cytosol | 60.31 | 67.52 |
| PGSC0003DMT400064404 | Potato | cytosol | 60.31 | 64.75 |
| Solyc10g006700.1.1 | Tomato | cytosol | 59.54 | 63.93 |
| KRH22182 | Soybean | cytosol | 54.96 | 62.07 |
| KRH27149 | Soybean | cytosol | 54.2 | 61.74 |
| Solyc10g006660.2.1 | Tomato | cytosol | 60.31 | 61.24 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 48.09 | 59.43 |
| KRH25972 | Soybean | cytosol | 52.67 | 57.98 |
| Os01t0783700-01 | Rice | cytosol | 48.85 | 57.66 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 49.62 | 56.03 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 47.33 | 55.86 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 46.56 | 54.95 |
| KXG33526 | Sorghum | cytosol | 42.75 | 54.9 |
| Zm00001d043258_P001 | Maize | cytosol | 38.93 | 54.84 |
| KRH55477 | Soybean | cytosol | 49.62 | 54.62 |
| Os06t0683400-02 | Rice | cytosol | 51.91 | 54.4 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 45.8 | 54.05 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 46.56 | 53.98 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 45.8 | 53.57 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 50.38 | 52.8 |
| Zm00001d031419_P001 | Maize | cytosol | 44.27 | 52.73 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 51.15 | 51.94 |
| KXG25648 | Sorghum | cytosol | 42.75 | 50.91 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 45.8 | 50.85 |
| VIT_19s0014g04650.t01 | Wine grape | cytosol | 56.49 | 49.33 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 50.38 | 49.25 |
| EER88832 | Sorghum | cytosol | 47.33 | 47.69 |
| Zm00001d014491_P001 | Maize | cytosol | 46.56 | 46.21 |
| CDX80031 | Canola | cytosol | 38.17 | 45.87 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 45.8 | 45.45 |
| CDX83356 | Canola | cytosol | 45.8 | 44.78 |
| CDX95707 | Canola | cytosol | 45.04 | 44.03 |
| CDY27313 | Canola | cytosol | 41.98 | 41.35 |
| CDY61726 | Canola | cytosol | 41.98 | 41.35 |
| CDY13397 | Canola | cytosol | 41.22 | 40.6 |
| CDX89262 | Canola | cytosol, peroxisome, plastid | 80.15 | 38.6 |
| CDY41540 | Canola | cytosol | 36.64 | 32.88 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 38.93 | 31.68 |
Protein Annotations
| EnsemblPlants:CDY42456 | EnsemblPlantsGene:GSBRNA2T00074879001 | Gene3D:1.10.238.10 | GO:A0A078HXI9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 |
| PANTHER:PTHR44180:SF1 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:CDY42456 | ProteinID:CDY42456.1 | ScanProsite:PS00018 |
| SEG:seg | SUPFAM:SSF47473 | UniParc:UPI0004EF326D | UniProt:A0A078HXI9 | MapMan:35.1 | : |
Description
BnaA10g08320DBnaA10g08320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXI9]
Coordinates
chrLK032525:+:79043..80476
Molecular Weight (calculated)
14482.1 Da
IEP (calculated)
4.172
GRAVY (calculated)
-0.312
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPQSSTRP THQNPQPTFH DLFPAMAGKL GGEGLIDELC KGFELLMDGD KGVITFESLR RNASAVLGLG DLTDDDVRCM IDEGDFDRDG ALNQMEFCVL
101: MFRLSPDLMD ASRFVVTEAI EEEFGDRTHG H
101: MFRLSPDLMD ASRFVVTEAI EEEFGDRTHG H
001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH
101: MFRLSPELME ASRCVVTEVI EEEFYRH
Arabidopsis Description
PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.