Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29293 | Canola | cytosol | 45.96 | 98.43 |
| Bra026364.1-P | Field mustard | cytosol | 98.9 | 92.12 |
| AT4G27280.1 | Thale cress | cytosol | 43.01 | 90.0 |
| CDY28767 | Canola | cytosol | 39.34 | 81.68 |
| CDY48640 | Canola | cytosol | 38.97 | 80.92 |
| CDY61745 | Canola | cytosol | 38.6 | 80.15 |
| CDY42456 | Canola | cytosol | 38.6 | 80.15 |
| PGSC0003DMT400064403 | Potato | cytosol | 28.31 | 65.81 |
| PGSC0003DMT400064404 | Potato | cytosol | 28.31 | 63.11 |
| Solyc10g006700.1.1 | Tomato | cytosol | 27.94 | 62.3 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 24.26 | 62.26 |
| KRH22182 | Soybean | cytosol | 26.47 | 62.07 |
| KRH27149 | Soybean | cytosol | 26.1 | 61.74 |
| KRH25972 | Soybean | cytosol | 26.47 | 60.5 |
| GSMUA_Achr7P27110_001 | Banana | cytosol | 25.74 | 60.34 |
| Solyc10g006660.2.1 | Tomato | cytosol | 28.31 | 59.69 |
| Os01t0783700-01 | Rice | cytosol | 23.9 | 58.56 |
| TraesCS3A01G315400.1 | Wheat | cytosol | 23.53 | 57.66 |
| KRH55477 | Soybean | cytosol | 25.0 | 57.14 |
| TraesCS3B01G351500.1 | Wheat | cytosol | 23.16 | 56.76 |
| Zm00001d031419_P001 | Maize | cytosol | 22.79 | 56.36 |
| GSMUA_Achr8P01460_001 | Banana | cytosol | 22.79 | 55.36 |
| TraesCS3D01G316100.1 | Wheat | cytosol | 22.43 | 54.95 |
| KXG33526 | Sorghum | cytosol | 20.59 | 54.9 |
| GSMUA_Achr9P30020_001 | Banana | cytosol | 22.79 | 54.87 |
| KXG25648 | Sorghum | cytosol | 22.06 | 54.55 |
| Zm00001d043258_P001 | Maize | cytosol | 18.38 | 53.76 |
| Os06t0683400-02 | Rice | cytosol | 24.63 | 53.6 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 24.63 | 53.6 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 23.16 | 53.39 |
| TraesCS7B01G350200.1 | Wheat | cytosol | 24.63 | 51.94 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 24.63 | 50.0 |
| VIT_19s0014g04650.t01 | Wine grape | cytosol | 27.57 | 50.0 |
| EER88832 | Sorghum | cytosol | 23.53 | 49.23 |
| Zm00001d014491_P001 | Maize | cytosol | 23.16 | 47.73 |
| HORVU3Hr1G077070.1 | Barley | cytosol | 22.43 | 46.21 |
| CDX80031 | Canola | cytosol | 18.38 | 45.87 |
| CDX83356 | Canola | cytosol | 22.43 | 45.52 |
| CDX95707 | Canola | cytosol | 22.06 | 44.78 |
| CDY61726 | Canola | cytosol | 21.32 | 43.61 |
| CDY27313 | Canola | cytosol | 20.96 | 42.86 |
| CDY13397 | Canola | cytosol | 20.96 | 42.86 |
| CDY41540 | Canola | cytosol | 19.85 | 36.99 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 19.49 | 32.92 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:3.40.50.360 | MapMan:35.1 | GO:A0A078DK12 | EnsemblPlants:CDX89262 | ProteinID:CDX89262 |
| ProteinID:CDX89262.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FMN_Rdtase-like | InterPro:Flavoprotein-like_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00149467001 | InterPro:IPR002048 | InterPro:IPR029039 | PFAM:PF03358 | PFAM:PF13833 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR30546 | PANTHER:PTHR30546:SF5 | SUPFAM:SSF47473 | SUPFAM:SSF52218 |
| UniParc:UPI0004EE3AC1 | SEG:seg | : | : | : | : |
Description
BnaA01g16310D
Coordinates
chrLK031858:+:540258..542269
Molecular Weight (calculated)
29281.3 Da
IEP (calculated)
4.485
GRAVY (calculated)
-0.037
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPKSPTRP TQQNPEPSFH DFLPAMAGKL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRSM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLMD ASRCLVTEAI EEEYGRMSEP PLFSLVTLPE DVLSKMSAPP KSDAPLITPN DLAEADGFVF AFPTRFGMMA AQFKAFLDST GGLWRTQQLA
201: GKPAAGIFYS TGSQGGGQET TALTAITQLV HHGMIFVPMG YTFGAGMFEM EKVKVGIGVG ASIPPGEVHC RH
101: MFRLSPDLMD ASRCLVTEAI EEEYGRMSEP PLFSLVTLPE DVLSKMSAPP KSDAPLITPN DLAEADGFVF AFPTRFGMMA AQFKAFLDST GGLWRTQQLA
201: GKPAAGIFYS TGSQGGGQET TALTAITQLV HHGMIFVPMG YTFGAGMFEM EKVKVGIGVG ASIPPGEVHC RH
001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
Arabidopsis Description
KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.