CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G27280.1	Thale cress	cytosol	91.34	89.23
CDY28767	Canola	cytosol	83.46	80.92
CDY48640	Canola	cytosol	82.68	80.15
CDY61745	Canola	cytosol	81.89	79.39
CDY42456	Canola	cytosol	81.89	79.39
PGSC0003DMT400064403	Potato	cytosol	59.84	64.96
KRH22182	Soybean	cytosol	57.48	62.93
PGSC0003DMT400064404	Potato	cytosol	59.84	62.3
KRH27149	Soybean	cytosol	55.91	61.74
Solyc10g006700.1.1	Tomato	cytosol	59.06	61.48
GSMUA_Achr3P23000_001	Banana	cytosol	51.18	61.32
KRH25972	Soybean	cytosol	55.91	59.66
GSMUA_Achr7P27110_001	Banana	cytosol	53.54	58.62
Solyc10g006660.2.1	Tomato	cytosol	59.06	58.14
Os01t0783700-01	Rice	cytosol	50.39	57.66
TraesCS3A01G315400.1	Wheat	cytosol	49.61	56.76
KRH55477	Soybean	cytosol	52.76	56.3
TraesCS3B01G351500.1	Wheat	cytosol	48.82	55.86
Zm00001d031419_P001	Maize	cytosol	48.03	55.45
GSMUA_Achr8P01460_001	Banana	cytosol	48.03	54.46
TraesCS3D01G316100.1	Wheat	cytosol	47.24	54.05
GSMUA_Achr9P30020_001	Banana	cytosol	48.03	53.98
KXG33526	Sorghum	cytosol	43.31	53.92
KXG25648	Sorghum	cytosol	46.46	53.64
TraesCS7A01G450400.1	Wheat	cytosol	52.76	53.6
Os06t0683400-02	Rice	cytosol	52.76	53.6
GSMUA_Achr5P26360_001	Banana	cytosol	49.61	53.39
Zm00001d043258_P001	Maize	cytosol	38.58	52.69
TraesCS7B01G350200.1	Wheat	cytosol	52.76	51.94
TraesCS7D01G439800.1	Wheat	cytosol	52.76	50.0
VIT_19s0014g04650.t01	Wine grape	cytosol	58.27	49.33
EER88832	Sorghum	cytosol	50.39	49.23
Zm00001d014491_P001	Maize	cytosol	49.61	47.73
CDX89262	Canola	cytosol, peroxisome, plastid	98.43	45.96
CDX80031	Canola	cytosol	39.37	45.87
HORVU3Hr1G077070.1	Barley	cytosol	47.24	45.45
CDX83356	Canola	cytosol	47.24	44.78
CDX95707	Canola	cytosol	46.46	44.03
CDY61726	Canola	cytosol	44.88	42.86
Bra026364.1-P	Field mustard	cytosol	96.85	42.12
CDY27313	Canola	cytosol	44.09	42.11
CDY13397	Canola	cytosol	44.09	42.11
CDY41540	Canola	cytosol	40.16	34.93
HORVU7Hr1G101740.2	Barley	cytosol, plastid	41.73	32.92

Protein Annotations

EnsemblPlants:CDY29293	EnsemblPlantsGene:GSBRNA2T00042245001	Gene3D:1.10.238.10	GO:A0A078GXE2	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44180
PANTHER:PTHR44180:SF1	PFAM:PF13833	PFscan:PS50222	ProteinID:CDY29293	ProteinID:CDY29293.1	ScanProsite:PS00018
SEG:seg	SUPFAM:SSF47473	UniParc:UPI0004EEBC02	UniProt:A0A078GXE2	MapMan:35.1	:

Description

BnaC01g19450DBnaC01g19450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXE2]

Coordinates

chrLK032234:-:284803..285362

Molecular Weight (calculated)

14068.8 Da

IEP (calculated)

4.146

GRAVY (calculated)

-0.236

Length

127 amino acids

Sequence
(BLAST)

001: MASPKSPTRP TQQNPEPSFH DFLPAMAGKL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAVVLGLG DLTDEDVRSM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLMD ASRCLVTEAI EEEYGRY

Best Arabidopsis Sequence Match ( AT4G27280.1 )
(BLAST)

001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH

Arabidopsis Description

KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.