Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra002984.1-P | Field mustard | cytosol | 99.24 | 99.24 |
CDY42456 | Canola | cytosol | 99.24 | 99.24 |
CDY28767 | Canola | cytosol | 87.79 | 87.79 |
CDY48640 | Canola | cytosol | 87.02 | 87.02 |
CDY29293 | Canola | cytosol | 79.39 | 81.89 |
AT5G54490.1 | Thale cress | cytosol | 78.63 | 81.1 |
PGSC0003DMT400064403 | Potato | cytosol | 61.07 | 68.38 |
PGSC0003DMT400064404 | Potato | cytosol | 61.07 | 65.57 |
Solyc10g006700.1.1 | Tomato | cytosol | 60.31 | 64.75 |
KRH22182 | Soybean | cytosol | 54.96 | 62.07 |
Solyc10g006660.2.1 | Tomato | cytosol | 61.07 | 62.02 |
KRH27149 | Soybean | cytosol | 54.2 | 61.74 |
GSMUA_Achr3P23000_001 | Banana | cytosol | 48.09 | 59.43 |
KRH25972 | Soybean | cytosol | 52.67 | 57.98 |
Os01t0783700-01 | Rice | cytosol | 48.85 | 57.66 |
GSMUA_Achr7P27110_001 | Banana | cytosol | 49.62 | 56.03 |
TraesCS3A01G315400.1 | Wheat | cytosol | 47.33 | 55.86 |
TraesCS3B01G351500.1 | Wheat | cytosol | 46.56 | 54.95 |
KXG33526 | Sorghum | cytosol | 42.75 | 54.9 |
Zm00001d043258_P001 | Maize | cytosol | 38.93 | 54.84 |
KRH55477 | Soybean | cytosol | 49.62 | 54.62 |
Os06t0683400-02 | Rice | cytosol | 51.91 | 54.4 |
TraesCS3D01G316100.1 | Wheat | cytosol | 45.8 | 54.05 |
GSMUA_Achr9P30020_001 | Banana | cytosol | 46.56 | 53.98 |
GSMUA_Achr8P01460_001 | Banana | cytosol | 45.8 | 53.57 |
TraesCS7A01G450400.1 | Wheat | cytosol | 50.38 | 52.8 |
Zm00001d031419_P001 | Maize | cytosol | 44.27 | 52.73 |
TraesCS7B01G350200.1 | Wheat | cytosol | 51.15 | 51.94 |
KXG25648 | Sorghum | cytosol | 42.75 | 50.91 |
GSMUA_Achr5P26360_001 | Banana | cytosol | 45.8 | 50.85 |
VIT_19s0014g04650.t01 | Wine grape | cytosol | 57.25 | 50.0 |
TraesCS7D01G439800.1 | Wheat | cytosol | 50.38 | 49.25 |
EER88832 | Sorghum | cytosol | 47.33 | 47.69 |
Zm00001d014491_P001 | Maize | cytosol | 46.56 | 46.21 |
CDX80031 | Canola | cytosol | 38.17 | 45.87 |
HORVU3Hr1G077070.1 | Barley | cytosol | 45.8 | 45.45 |
CDX83356 | Canola | cytosol | 45.8 | 44.78 |
CDX95707 | Canola | cytosol | 45.04 | 44.03 |
CDY27313 | Canola | cytosol | 41.98 | 41.35 |
CDY61726 | Canola | cytosol | 41.98 | 41.35 |
CDY13397 | Canola | cytosol | 41.22 | 40.6 |
CDX89262 | Canola | cytosol, peroxisome, plastid | 80.15 | 38.6 |
CDY41540 | Canola | cytosol | 36.64 | 32.88 |
HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 38.93 | 31.68 |
Protein Annotations
EnsemblPlants:CDY61745 | EnsemblPlantsGene:GSBRNA2T00034331001 | Gene3D:1.10.238.10 | GO:A0A078J5N9 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44180 |
PANTHER:PTHR44180:SF1 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:CDY61745 | ProteinID:CDY61745.1 | ScanProsite:PS00018 |
SEG:seg | SUPFAM:SSF47473 | UniParc:UPI0004EBF899 | UniProt:A0A078J5N9 | MapMan:35.1 | : |
Description
BnaCnng38440DBnaCnng38440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5N9]
Coordinates
chrLK034035:-:31248..31887
Molecular Weight (calculated)
14495.1 Da
IEP (calculated)
4.172
GRAVY (calculated)
-0.334
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPQSSTRP THQNPQPNFH DLFPAMAGKL GGEGLIDELC KGFELLMDGD KGVITFESLR RNASAVLGLG DLTDDDVRCM IDEGDFDRDG ALNQMEFCVL
101: MFRLSPDLMD ASRFVVTEAI EEEFGDRTHG H
101: MFRLSPDLMD ASRFVVTEAI EEEFGDRTHG H
001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
Arabidopsis Description
KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.