CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70218
CDX82059
CDX84294
CDX88606
CDX96484
CDY11886
CDY17273
CDY20694
CDY28767
CDY38263
CDY42456
CDY43662
CDY44862
CDY47745
CDY48640
CDY53978
CDY61745
CDY69709
CDY72296

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	CDX82059	AT1G73590.1	17889649
AT2G34650.1	CDX96484	AT1G73590.1	17889649
AT2G34650.1	CDY47745	AT1G73590.1	17889649
AT2G34650.1	CDY72296	AT1G73590.1	17889649
AT2G34650.1	CDX84294	AT2G34650.1	12857841
AT2G34650.1	CDY17273	AT2G34650.1	12857841
AT2G34650.1	CDY43662	AT2G34650.1	12857841
AT2G34650.1	CDX70218	AT5G04510.1	16601102
AT2G34650.1	CDY44862	AT5G04510.1	16601102
AT2G34650.1	CDY28767	AT5G54490.1	12857841
AT2G34650.1	CDY42456	AT5G54490.1	12857841
AT2G34650.1	CDY48640	AT5G54490.1	12857841
AT2G34650.1	CDY61745	AT5G54490.1	12857841
AT2G34650.1	CDX88606	AT5G57090.1	17889649
AT2G34650.1	CDY11886	AT5G57090.1	17889649
AT2G34650.1	CDY20694	AT5G57090.1	17889649
AT2G34650.1	CDY38263	AT5G57090.1	17889649
AT2G34650.1	CDY53978	AT5G57090.1	17889649
AT2G34650.1	CDY69709	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021925.1-P	Field mustard	cytosol	99.77	99.77
CDY17273	Canola	cytosol	92.71	92.71
CDX84294	Canola	cytosol, plastid	92.48	92.48
AT2G34650.1	Thale cress	cytosol	90.2	90.41
KRH21098	Soybean	cytosol, plastid	67.2	65.27
KRH59216	Soybean	cytosol	67.88	64.78
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	66.51	64.75
GSMUA_Achr7P01120_001	Banana	nucleus	53.76	55.79
TraesCS5B01G377300.1	Wheat	plastid	51.03	52.21
Os12t0614600-01	Rice	cytosol	54.67	49.59
TraesCS5D01G044800.1	Wheat	plasma membrane	53.76	49.37
TraesCS5A01G375200.1	Wheat	plastid	51.48	49.34
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	53.3	49.06
Zm00001d033234_P001	Maize	plastid	52.16	48.62
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	52.85	48.54
Os03t0642300-00	Rice	plastid	50.8	48.37
OQU79615	Sorghum	cytosol, plastid	55.13	47.92
EER93759	Sorghum	plastid	52.16	47.91
HORVU5Hr1G009390.1	Barley	cytosol, nucleus, plasma membrane	52.62	47.83
Zm00001d031068_P001	Maize	plastid	52.62	47.05
GSMUA_Achr5P02480_001	Banana	nucleus	49.89	47.0
HORVU5Hr1G093040.2	Barley	plastid	51.25	42.69
CDY20744	Canola	cytosol, plastid	44.87	40.87
CDY48186	Canola	cytosol	45.33	40.78
CDY06552	Canola	cytosol, plastid	44.65	40.5
CDY11972	Canola	cytosol, plastid	45.33	40.45
CDY17366	Canola	cytosol, plastid	45.79	40.2
CDY08710	Canola	cytosol, plastid	40.32	40.14
CDY36769	Canola	cytosol, plastid	44.87	40.04
CDY28629	Canola	cytosol, plastid	45.56	40.0
CDX74407	Canola	cytosol, plastid	42.14	38.7
CDX89320	Canola	cytosol	44.19	37.82
CDX94306	Canola	cytosol	44.19	37.82
CDY33329	Canola	cytosol	41.69	37.58
CDY30287	Canola	cytosol, plastid	42.14	36.85
CDY35093	Canola	cytosol	42.37	36.47
CDY17708	Canola	cytosol	45.56	36.1
CDX98447	Canola	nucleus	38.95	36.08
CDX83710	Canola	cytosol, plastid	44.65	35.7
CDX97569	Canola	nucleus	38.95	35.7
CDX77795	Canola	cytosol	45.79	35.2
CDY30659	Canola	nucleus	39.18	35.03
CDX74691	Canola	cytosol	44.42	35.01
CDY67737	Canola	nucleus	39.18	34.96
CDY56474	Canola	cytosol	44.65	34.27
CDY13725	Canola	plastid	43.96	33.51
CDY42166	Canola	cytosol, plastid	43.28	33.39
CDY08414	Canola	cytosol, plastid	43.28	33.27
CDY50542	Canola	cytosol	42.82	32.87
CDY30488	Canola	cytosol	45.33	32.2
CDY23458	Canola	cytosol	44.65	30.34
CDY13336	Canola	cytosol, plastid	44.19	27.87
CDX75049	Canola	cytosol	41.23	25.03
CDX67542	Canola	cytosol	44.65	24.41
CDX84133	Canola	cytosol	41.0	23.41
CDX77055	Canola	cytosol	45.79	23.4
CDX76251	Canola	cytosol	41.91	22.36
CDX70297	Canola	cytosol	44.65	22.35
CDY10368	Canola	cytosol	44.65	21.68
CDX73596	Canola	cytosol	44.42	19.4
CDX78131	Canola	cytosol	44.42	19.31
CDY33330	Canola	cytosol, mitochondrion, nucleus	6.83	18.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.2.4.1.2	Gene3D:3.30.200.20	GO:A0A078I0P3	UniProt:A0A078I0P3	EnsemblPlants:CDY43662
ProteinID:CDY43662	ProteinID:CDY43662.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00077009001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF177
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE0889	SEG:seg

Description

BnaA04g20290DBnaA04g20290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0P3]

Coordinates

chrLK032564:+:129124..130813

Molecular Weight (calculated)

49162.0 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.250

Length

439 amino acids

Sequence
(BLAST)

001: MLLESDGEMS LETTNSPISS GTESCSSFSR LSFDAPPSTT AIIPEEESCL TLKPHRSSDF AYAEILRRRK HSLTFRDFRL MRRIGAGDIG TVYLCRLAGD
101: QEESRSSYFA MKVVDNEALA MKKKMHRAEM EKKILKMLDH PFLPSLYAEF EASHFSCIVM EYCSGGDLHS LRHKQPQHRF SLSSARFYAA EVLVALEYLH
201: MLGIIYRDLK PENILVRSDG HIMLSDFDLS LCSDSIAAVE SSSSTPENYP HSSPRRLTRL AKLFNRVLRS KKVQTLEPNR LFVAEPVTAR SGSFVGTHEY
301: VAPEVASGGS HGNAVDWWAF GVFLYEIIYG RTPFAAPTND VILRNIVKRP LSFPTDSAAT MFELHARSLI SGLLNKDPSK RLGSRRGAAE VKVHPFFKGL
401: NFALIRTMTP PEVPSDVRRP KKSATFGGRS SKPAAFDFF

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.