CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70218
CDY24170
CDY36943
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27580.1	CDY24170	AT3G47620.1	21798944
AT3G27580.1	CDY36943	AT3G47620.1	21798944
AT3G27580.1	CDX70218	AT5G04510.1	16973627
AT3G27580.1	CDY44862	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025288.1-P	Field mustard	cytosol	98.72	92.18
CDY13725	Canola	plastid	95.08	90.62
AT3G27580.1	Thale cress	cytosol, plastid	83.24	79.07
GSMUA_Achr5P00910_001	Banana	extracellular	35.88	69.61
CDY20744	Canola	cytosol, plastid	56.47	64.32
CDY06552	Canola	cytosol, plastid	56.65	64.26
CDY36769	Canola	cytosol, plastid	56.28	62.8
CDY11972	Canola	cytosol, plastid	56.28	62.8
CDY28629	Canola	cytosol, plastid	56.83	62.4
CDY17366	Canola	cytosol, plastid	56.65	62.2
CDX94306	Canola	cytosol	56.83	60.82
CDX89320	Canola	cytosol	56.47	60.43
Solyc02g093360.2.1	Tomato	cytosol	67.94	59.68
PGSC0003DMT400032816	Potato	cytosol	68.31	59.43
KRG93211	Soybean	cytosol	64.85	58.17
CDY17708	Canola	cytosol	56.83	56.32
Solyc02g067830.2.1	Tomato	cytosol	64.12	56.14
KRG94078	Soybean	cytosol, plastid	64.48	56.1
KRH07149	Soybean	cytosol	63.93	55.63
CDX77795	Canola	cytosol	57.01	54.82
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	67.4	54.57
CDX74407	Canola	cytosol, plastid	47.18	54.18
PGSC0003DMT400017808	Potato	cytosol, plastid	65.57	54.05
CDY33329	Canola	cytosol	46.81	52.77
CDY30287	Canola	cytosol, plastid	48.09	52.59
CDY35093	Canola	cytosol	46.27	49.8
CDX74691	Canola	cytosol	49.54	48.83
CDY56474	Canola	cytosol	49.54	47.55
CDY08710	Canola	cytosol, plastid	37.7	46.94
CDY08414	Canola	cytosol, plastid	47.18	45.36
CDY42166	Canola	cytosol, plastid	46.99	45.34
CDY43662	Canola	cytosol	35.7	44.65
CDX84294	Canola	cytosol, plastid	35.7	44.65
CDY50542	Canola	cytosol	46.45	44.58
CDY17273	Canola	cytosol	35.15	43.96
CDY30488	Canola	cytosol	48.82	43.37
CDY23458	Canola	cytosol	49.0	41.64
CDY48186	Canola	cytosol	35.52	39.96
CDX98447	Canola	nucleus	32.97	38.19
CDX97569	Canola	nucleus	32.97	37.79
CDY30659	Canola	nucleus	32.24	36.05
CDY67737	Canola	nucleus	32.24	35.98
CDY13336	Canola	cytosol, plastid	45.54	35.92
CDX75049	Canola	cytosol	42.81	32.5
CDX67542	Canola	cytosol	45.72	31.26
CDX84133	Canola	cytosol	42.99	30.69
CDX70297	Canola	cytosol	45.9	28.73
CDX76251	Canola	cytosol	42.81	28.55
CDY10368	Canola	cytosol	45.72	27.77
CDX73596	Canola	cytosol	45.9	25.07
CDX78131	Canola	cytosol	46.08	25.05
CDY33330	Canola	cytosol, mitochondrion, nucleus	7.29	24.54
CDX77055	Canola	cytosol	35.52	22.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078D3J7	EnsemblPlants:CDX83710	ProteinID:CDX83710
ProteinID:CDX83710.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00139416001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF86	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDCBD5	SEG:seg	:

Description

BnaC07g24500D

Coordinates

chrLK031833:-:1741297..1744876

Molecular Weight (calculated)

61335.3 Da

IEP (calculated)

9.402

GRAVY (calculated)

-0.420

Length

549 amino acids

Sequence
(BLAST)

001: MDPSIDHASS SSKPRNTHAK SKPSVTSRSI DSRATKKQEP PLTATETSPE VLEQHSVSSH ITQKTKNKKK KQPEPRFYPS PTNTFYTAPL YTEAKQSFSD
101: CASTLNVGGI DLEKMGVLTY RGSTGSDESS SSGLSNSAGY KPHRANNDKR WVAIQEVRSR VGSSLEAKDF KLVKRLGGGD IGTVYLAELI GTGETFAVKV
201: MEKAAIAARK KLVRAQTERE ILQSLDHPFL PTLYSHFETE NHSCLVMEFC PGGDLHSLRQ KQPGKYFPEH AARFYVAEVL LAMEYLHMLG IIYRDLKPEN
301: VLVREDGHIM LSDFDLSLRC SVSPTLVRFA ATTTLESKTS SYCIQPSCIV QPDCIQPVCF TPRFLSKSKN KKKLNESARQ VRPLPELMAE PTSARSMSFV
401: GTHEYLAPEI IKGEGHGSAV DWWTFGIFLY ELLFGKTPFR GDVNRATLFN VVGQPLRFPE HPSVSFAARD LIRGLLVKEP QHRLAYRRGA TEIKQHPFFQ
501: SINWALIRCT NPPQVPQPVK IMDNAQNAKP PTVVVDVKPS GNYLEIDFF

Best Arabidopsis Sequence Match ( AT3G27580.1 )
(BLAST)

001: MDSSSSVVYV GSSSKSRNFQ SKSKGSITSF SIDSRGTKKS MKTLLIPEPE PTSPEVIESS VSSVSAESET PISIIRKKKQ SEPRFYSSPT NTFYTEAKQS
101: FTNTEFSECA SISTIGIGGI DLEKNGVMIY RGSIGSDVSD ESSSSGLSNA AYKPHRDNND KRWVAIQEVR SRVGSSLEAK DFKLIKKLGG GDIGNVYLAE
201: LIGTGVSFAV KVMEKAAIAA RKKLVRAQTE KEILQSLDHP FLPTLYSHFE TEMNSCLVME FCPGGDLHSL RQKQRGKYFP EQAARFYVAE VLLAMEYLHM
301: LGIIYRDLKP ENVLVREDGH IMLSDFDLSL RCAVSPTLVR FAAITLESKS SSYCIQPTCV DQSSCIVQPD CIQPVCFTPR FLSKGKHRKK SNDMSRQIRP
401: LPELIAEPTS ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGITPFRGGD NRATLFNVVG QPLRFPEHPN VSFAARDLIR GLLVKEPQHR
501: LAYRRGATEI KQHPFFQSVN WALIRCTSPP QIPQPVKPMD QAHSVRHGFS QGHGHVGYDK PPTVDVKPSG NYLEIDFF

Arabidopsis Description

D6PKL3Serine/threonine-protein kinase D6PKL3 [Source:UniProtKB/Swiss-Prot;Acc:Q05999]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.