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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30488 Canola cytosol 89.01 93.04
Bra037631.1-P Field mustard cytosol 90.71 90.43
CDX74691 Canola cytosol 70.43 81.69
CDY56474 Canola cytosol 70.9 80.07
AT2G44830.2 Thale cress cytosol 82.82 69.93
GSMUA_Achr1P00540_001 Banana cytosol 55.57 68.51
GSMUA_AchrUn_... Banana cytosol 54.33 67.11
GSMUA_Achr7P06890_001 Banana cytosol 54.33 65.0
GSMUA_Achr5P12590_001 Banana cytosol 52.32 63.77
Os10t0562500-01 Rice cytosol 41.8 63.38
TraesCS6B01G281400.1 Wheat cytosol 50.93 59.07
Solyc01g090240.2.1 Tomato cytosol 62.85 58.0
PGSC0003DMT400067034 Potato cytosol 62.69 57.86
VIT_15s0021g01540.t01 Wine grape cytosol 63.47 57.58
CDY20744 Canola cytosol, plastid 42.88 57.47
CDY06552 Canola cytosol, plastid 43.03 57.44
EES11209 Sorghum cytosol 60.99 57.43
Zm00001d025997_P001 Maize cytosol 60.37 56.93
CDY11972 Canola cytosol, plastid 43.03 56.5
CDY36769 Canola cytosol, plastid 42.88 56.3
Os04t0546300-01 Rice cytosol 60.37 56.12
HORVU2Hr1G093580.1 Barley cytosol 60.06 56.07
TraesCS2B01G411000.1 Wheat cytosol 59.91 55.92
TraesCS2D01G391000.1 Wheat cytosol 59.91 55.92
TraesCS2A01G392900.1 Wheat cytosol 59.91 55.84
CDY28629 Canola cytosol, plastid 43.19 55.8
CDY17366 Canola cytosol, plastid 43.19 55.8
Os02t0654300-01 Rice cytosol 59.13 55.36
KRH01064 Soybean cytosol 65.17 54.82
CDX74407 Canola cytosol, plastid 40.4 54.6
KRH40174 Soybean cytosol 64.71 54.57
KRH48818 Soybean cytosol 63.78 54.0
CDX89320 Canola cytosol 42.88 54.0
KRH66511 Soybean nucleus 63.62 53.87
CDX94306 Canola cytosol 42.72 53.8
TraesCS6A01G242800.1 Wheat cytosol 54.18 53.68
CDY17708 Canola cytosol 45.98 53.61
HORVU6Hr1G062330.1 Barley cytosol 55.26 53.28
TraesCS6D01G225100.1 Wheat cytosol 54.33 53.1
CDY30287 Canola cytosol, plastid 40.71 52.39
CDX77795 Canola cytosol 46.13 52.19
PGSC0003DMT400068494 Potato cytosol 56.04 51.49
EER91921 Sorghum cytosol 52.17 51.37
Solyc10g038190.1.1 Tomato cytosol 55.26 51.22
Zm00001d029948_P001 Maize cytosol 51.08 50.38
CDY33329 Canola cytosol 37.93 50.31
Zm00001d000038_P001 Maize cytosol, mitochondrion 50.77 50.15
TraesCS1A01G218500.1 Wheat cytosol, plastid 49.07 49.69
TraesCS1D01G220100.1 Wheat cytosol, plastid 49.23 49.61
TraesCS1B01G232000.1 Wheat plastid 49.23 49.46
CDX83710 Canola cytosol, plastid 41.64 49.0
CDY35093 Canola cytosol 38.24 48.43
CDY13725 Canola plastid 41.64 46.7
CDY08710 Canola cytosol, plastid 30.8 45.12
CDX84294 Canola cytosol, plastid 30.65 45.1
CDY17273 Canola cytosol 30.65 45.1
CDY43662 Canola cytosol 30.34 44.65
CDY42166 Canola cytosol, plastid 39.01 44.29
CDY08414 Canola cytosol, plastid 39.01 44.13
CDY50542 Canola cytosol 38.39 43.36
CDY48186 Canola cytosol 31.58 41.8
CDX97569 Canola nucleus 28.95 39.04
CDX98447 Canola nucleus 28.64 39.03
CDY67737 Canola nucleus 29.26 38.41
CDY30659 Canola nucleus 28.79 37.88
CDY13336 Canola cytosol, plastid 39.63 36.78
CDX75049 Canola cytosol 38.24 34.16
CDX67542 Canola cytosol 39.94 32.13
CDX84133 Canola cytosol 37.77 31.73
CDX70297 Canola cytosol 40.4 29.76
CDX76251 Canola cytosol 37.31 29.28
CDY10368 Canola cytosol 40.56 28.98
HORVU1Hr1G055800.1 Barley cytosol 33.28 27.67
CDX73596 Canola cytosol 40.56 26.07
CDX78131 Canola cytosol 40.56 25.94
CDX77055 Canola cytosol 31.58 23.75
CDY33330 Canola cytosol, mitochondrion, nucleus 5.88 23.31
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5MapMan:27.2.9Gene3D:3.30.200.20GO:A0A078GFP8UniProt:A0A078GFP8
EnsemblPlants:CDY23458ProteinID:CDY23458ProteinID:CDY23458.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00022076001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351
PANTHER:PTHR24351:SF106InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF127D
SEG:seg:::::
Description
BnaC04g49860DBnaC04g49860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFP8]
Coordinates
chrLK032143:+:562947..566905
Molecular Weight (calculated)
71846.3 Da
IEP (calculated)
7.110
GRAVY (calculated)
-0.464
Length
646 amino acids
Sequence
(BLAST)
001: MKLNQVIIVG EKKKQTRISQ KKKTSDKKTE QKKRIKILDM ERVAELKRLP SKVPFSRRQH SNFESRDASM HLEYNNTGRR PINPTTTTLG RELGLVLNVH
101: REEFGGNHNE FQEFEPVVRS ANHPLLEIEE IVAAADADDM SEEPGSSSFR GVSHPPEPDD MDLITTATSP SPISMPRASH NTDHSDKECV WDSSPHNSSV
201: RAMSIANSSS STQRSDVVFS MDKSYMFESA KTSASDISGL SEESSWSSFT GSLNKPHKGN DPRWNAITAV RARDGVLGMS HFKLLRRLGC GDIGSVYLAE
301: LSGTRCVFAV KVMDKASLED RKKLNRAQTE REILQLLDHP FLPTLYAHFE TDRFSCLVME YCPGGDLHAL RQRQPGKHFS EYAARFYAAE VLLALEYLHM
401: LGVVYRDLKP ENVLVRDDGH IMLSDFDLSL RCAVSPTLIK TFDSDPSKRG AFCVQPSCMM EPTTSSHSGS LPELVAEPNT RSMSFVGTHE YLAPEIIKGE
501: GHGSAVDWWT FGIFVHELLY GKTPFKGSGN RATLFNVVGE QLKFPESPAT SYAGRDLVQA LLVKDPKNRL GTKRGATEIK QHPFFEGVNW ALIRCGTPPE
601: VPRQMEIEPP PKYGPIDPVG FVISAASAGA GGDTKTGGKF LDFEFF
Best Arabidopsis Sequence Match ( AT2G44830.2 )
(BLAST)
001: MLEMERVAEL KRLPSKGPVS GHLSRRPYLD FETRDAPGMH LESLRERAAR YNTGRSVNPT TTLGRELSQV LNVHREDMMM TQFGGNMNDF QEFEPVVSSV
101: RTMKAKYPLL EIEEIGAADD DVTCKGSNDM SEEAGSSSFR GVSHPPEPDD MDLITTVYVP ISEKNKPDSV CLMKSMSTTK GPFIEDISLC VPPKKPSPRV
201: LSPAESIVEE PATSLSPFSV ARASQNTENS LLPPDSDKEC VWDASLPPST NVSPHSSSVE SMNLARAMSI ANSSSATSTT QRSDVVLSMD KNYFDRSISM
301: VLDSFESTKT SASRASDSSG LSEESSWSNF TGSLNKPHKG NDPWWNAILA IRTRDGILGM SHFKLLKRLG CGDIGSVYLA ELSGTRCHFA VKVMDKASLE
401: DRKKLNRAQT ERDILQLLDH PFLPTLYTHF ETDRFSCLVM EYCPGGDLHT LRQRQPGKHF SEYAARFYAA EVLLALEYLH MLGVVYRDLK PENVLVRDDG
501: HIMLSDFDLS LRCAVSPTLI KTFDSDPSRR GAFCVQPACM EPTSACIIQP SCFLPRSIFP NKNKKNKSRK TQADFFKSHS GSLPELVAEP NTRSMSFVGT
601: HEYLAPEIIK GEGHGSAVDW WTFGIFVHEL LYGKTPFKGS GNRATLFNVV GEQLKFPESP ATSYAGRDLI QALLVKDPKN RLGTKRGATE IKQHPFFEGV
701: NWALIRCSTP PEVPRQMETE PPPKYGPIDP VGFGSNSKRM MGPPAVSAAA ADTKSGGKFL DFEFF
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV25]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.