Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14370.1 | CDX70218 | AT5G04510.1 | 16973627 |
| AT3G14370.1 | CDY44862 | AT5G04510.1 | 16973627 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97569 | Canola | nucleus | 98.52 | 97.49 |
| AT3G14370.1 | Thale cress | nucleus | 93.67 | 92.5 |
| CDY67737 | Canola | nucleus | 76.16 | 73.37 |
| CDY30659 | Canola | nucleus | 75.74 | 73.12 |
| KRH43840 | Soybean | cytosol | 63.29 | 64.94 |
| VIT_19s0027g00020.t01 | Wine grape | nucleus, plastid | 64.14 | 64.14 |
| KRH13630 | Soybean | nucleus | 63.92 | 63.39 |
| PGSC0003DMT400079838 | Potato | nucleus | 62.45 | 61.54 |
| Solyc07g056400.1.1 | Tomato | nucleus | 62.66 | 61.49 |
| GSMUA_Achr4P18040_001 | Banana | cytosol | 44.09 | 46.34 |
| GSMUA_Achr4P21830_001 | Banana | cytosol | 43.04 | 45.95 |
| Os03t0253200-01 | Rice | nucleus | 41.98 | 39.17 |
| CDY43662 | Canola | cytosol | 36.08 | 38.95 |
| TraesCS4D01G222200.1 | Wheat | nucleus | 42.41 | 38.8 |
| CDY08710 | Canola | cytosol, plastid | 36.08 | 38.78 |
| CDX84294 | Canola | cytosol, plastid | 35.87 | 38.72 |
| CDY17273 | Canola | cytosol | 35.87 | 38.72 |
| TraesCS4B01G221800.1 | Wheat | nucleus | 42.19 | 38.68 |
| TraesCS4A01G082200.1 | Wheat | nucleus | 41.77 | 38.15 |
| HORVU4Hr1G062610.1 | Barley | nucleus, vacuole | 41.35 | 37.33 |
| EER95166 | Sorghum | nucleus | 41.14 | 37.14 |
| CDY20744 | Canola | cytosol, plastid | 37.55 | 36.93 |
| CDY06552 | Canola | cytosol, plastid | 37.55 | 36.78 |
| Zm00001d028447_P001 | Maize | nucleus | 40.93 | 36.67 |
| CDY11972 | Canola | cytosol, plastid | 37.97 | 36.59 |
| CDY48186 | Canola | cytosol | 37.55 | 36.48 |
| CDY36769 | Canola | cytosol, plastid | 37.76 | 36.38 |
| CDX74407 | Canola | cytosol, plastid | 36.5 | 36.19 |
| CDY17366 | Canola | cytosol, plastid | 37.34 | 35.4 |
| CDY28629 | Canola | cytosol, plastid | 37.34 | 35.4 |
| CDX94306 | Canola | cytosol | 37.97 | 35.09 |
| CDX89320 | Canola | cytosol | 37.97 | 35.09 |
| CDY30287 | Canola | cytosol, plastid | 37.13 | 35.06 |
| CDY33329 | Canola | cytosol | 35.65 | 34.7 |
| CDY17708 | Canola | cytosol | 39.45 | 33.75 |
| CDY35093 | Canola | cytosol | 35.87 | 33.33 |
| CDX83710 | Canola | cytosol, plastid | 38.19 | 32.97 |
| CDX77795 | Canola | cytosol | 39.45 | 32.75 |
| CDX74691 | Canola | cytosol | 38.19 | 32.5 |
| CDY56474 | Canola | cytosol | 38.61 | 31.99 |
| CDY13725 | Canola | plastid | 37.76 | 31.08 |
| CDY42166 | Canola | cytosol, plastid | 36.5 | 30.4 |
| CDY08414 | Canola | cytosol, plastid | 36.5 | 30.3 |
| CDY30488 | Canola | cytosol | 39.45 | 30.26 |
| CDY50542 | Canola | cytosol | 36.08 | 29.9 |
| CDY23458 | Canola | cytosol | 39.03 | 28.64 |
| CDY13336 | Canola | cytosol, plastid | 36.29 | 24.71 |
| CDX75049 | Canola | cytosol | 33.97 | 22.27 |
| CDX67542 | Canola | cytosol | 37.34 | 22.04 |
| CDX84133 | Canola | cytosol | 33.76 | 20.81 |
| CDX77055 | Canola | cytosol | 37.34 | 20.61 |
| CDX76251 | Canola | cytosol | 35.23 | 20.29 |
| CDX70297 | Canola | cytosol | 36.71 | 19.84 |
| CDY10368 | Canola | cytosol | 37.13 | 19.47 |
| CDY33330 | Canola | cytosol, mitochondrion, nucleus | 6.33 | 18.4 |
| CDX78131 | Canola | cytosol | 37.97 | 17.82 |
| CDX73596 | Canola | cytosol | 37.76 | 17.81 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:A0A078EBQ4 | EnsemblPlants:CDX98447 | ProteinID:CDX98447 |
| ProteinID:CDX98447.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00106056001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF82 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE2435 | SEG:seg | : |
Description
BnaC05g39280D
Coordinates
chrLK031905:-:137203..139834
Molecular Weight (calculated)
53554.6 Da
IEP (calculated)
9.826
GRAVY (calculated)
-0.436
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEIYFPDT DLDLSFTSTV TDRTFASSSG RSSLTLSFND RLSTSSAVTT SSTSSSTINH RRQDPHWSAI KSAKLLSSDG NIHLRHLKLI RHLGTGNLGR
101: VFLCNLRDPS ARFALKVIDR NNLTTAKKLS QVETEAEILS LLDHPFLPTL HARIDESHYT CLLIDYAPNG DLHSLLRKQP GNRLPLQPVR FFAAEVLVAL
201: EYLHAMGIVY RDLKPENVLL REDGHVMLSD FDLCFKSDVV PTFKSRRYRR TSSSRSGCFS AAPAEEKYER EEIVSEFTAE PVTAFSRSCV GTHEYLAPEL
301: VSGNGHGSGV DWWAFGIFLY ELLYGTTPFK GDSKEQTLRN IVSTTKTVRF HVDSDLDEAR DLIEKLLVKD PKKRLGCARG AQDIKRHPFF DGIKWPLIRH
401: YKPPEEVRGL VIKKSTRAHA GHVTAVTPRR RKSFLWRALS YILRGKSSSG GSKNQSNSNY YHYVGKSYAS RKRV
101: VFLCNLRDPS ARFALKVIDR NNLTTAKKLS QVETEAEILS LLDHPFLPTL HARIDESHYT CLLIDYAPNG DLHSLLRKQP GNRLPLQPVR FFAAEVLVAL
201: EYLHAMGIVY RDLKPENVLL REDGHVMLSD FDLCFKSDVV PTFKSRRYRR TSSSRSGCFS AAPAEEKYER EEIVSEFTAE PVTAFSRSCV GTHEYLAPEL
301: VSGNGHGSGV DWWAFGIFLY ELLYGTTPFK GDSKEQTLRN IVSTTKTVRF HVDSDLDEAR DLIEKLLVKD PKKRLGCARG AQDIKRHPFF DGIKWPLIRH
401: YKPPEEVRGL VIKKSTRAHA GHVTAVTPRR RKSFLWRALS YILRGKSSSG GSKNQSNSNY YHYVGKSYAS RKRV
001: MEQEDFYFPD TDLDLSFTST TTDRTFASSS ARTSLTLSFN DRLSTSSAVT TSSTSSSSVN HRRHDPHWSA IKSAKLLSSD GNIHLRHLKL IRHLGTGNLG
101: RVFLCNLRDS SARFALKVID RNCLTTEKKL SQVETEAEIL SLLDHPFLPT LYARIDESHY TCLLIDYAPN GDLHSLLRKQ PGNRLPIQPV RFFAAEVLVA
201: LEYLHAMGIV YRDLKPENVL LREDGHVMLS DFDLCFKSDV VPTFKSRRYR RSSSSPSLRR RRSGCFSVAA EKKYEREEIV SEFAAEPVTA FSRSCVGTHE
301: YLAPELVSGN GHGSGVDWWA FGIFLYELLY GTTPFKGESK EQTLRNIVST TKTASFHMDG DLDEARDLIE KLLVKDPRKR LGCARGAQDI KRHPFFDGIK
401: WPLIRHYKPP EEVRGLVIKK STRPHASHVI AVSPRRRKSF LWRALSYLLR GKSSSGGSKN QSNSNYYHYV GKSYASRKRV
101: RVFLCNLRDS SARFALKVID RNCLTTEKKL SQVETEAEIL SLLDHPFLPT LYARIDESHY TCLLIDYAPN GDLHSLLRKQ PGNRLPIQPV RFFAAEVLVA
201: LEYLHAMGIV YRDLKPENVL LREDGHVMLS DFDLCFKSDV VPTFKSRRYR RSSSSPSLRR RRSGCFSVAA EKKYEREEIV SEFAAEPVTA FSRSCVGTHE
301: YLAPELVSGN GHGSGVDWWA FGIFLYELLY GTTPFKGESK EQTLRNIVST TKTASFHMDG DLDEARDLIE KLLVKDPRKR LGCARGAQDI KRHPFFDGIK
401: WPLIRHYKPP EEVRGLVIKK STRPHASHVI AVSPRRRKSF LWRALSYLLR GKSSSGGSKN QSNSNYYHYV GKSYASRKRV
Arabidopsis Description
WAG2WAG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VAK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.