CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	KRG92082	AT5G04510.1	16973627
AT1G53700.1	KRH34704	AT5G04510.1	16973627
AT3G14370.1	KRG92082	AT5G04510.1	16973627
AT3G14370.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43840	Soybean	cytosol	83.26	86.15
PGSC0003DMT400079838	Potato	nucleus	67.57	67.15
Solyc07g056400.1.1	Tomato	nucleus	67.78	67.08
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	65.06	65.61
CDX98447	Canola	nucleus	63.39	63.92
AT1G53700.1	Thale cress	cytosol	63.6	63.87
Bra027344.1-P	Field mustard	nucleus	63.39	63.26
CDX97569	Canola	nucleus	63.39	63.26
AT3G14370.1	Thale cress	nucleus	63.18	62.92
CDY67737	Canola	nucleus	64.02	62.2
Bra041025.1-P	Field mustard	nucleus	64.02	62.2
CDY30659	Canola	nucleus	63.81	62.12
GSMUA_Achr4P18040_001	Banana	cytosol	46.03	48.78
GSMUA_Achr4P21830_001	Banana	cytosol	45.19	48.65
KRH34744	Soybean	cytosol	36.19	41.79
KRG92038	Soybean	cytosol	36.82	41.71
KRH63005	Soybean	nucleus	42.26	41.39
Os03t0253200-01	Rice	nucleus	43.72	41.14
TraesCS4D01G222200.1	Wheat	nucleus	44.14	40.73
TraesCS4B01G221800.1	Wheat	nucleus	43.93	40.62
KRH26592	Soybean	nucleus	38.49	40.62
TraesCS4A01G082200.1	Wheat	nucleus	43.51	40.08
KRH59216	Soybean	cytosol	38.49	40.0
KRH21098	Soybean	cytosol, plastid	37.66	39.82
EER95166	Sorghum	nucleus	43.72	39.81
KRH56632	Soybean	plastid	40.59	39.75
KRH03726	Soybean	plastid	40.59	39.59
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	43.1	39.24
Zm00001d028447_P001	Maize	nucleus	43.31	39.13
KRH30493	Soybean	cytosol, plastid	35.98	39.0
KRH25188	Soybean	nucleus, plastid	35.56	38.99
KRH22717	Soybean	nucleus	38.49	37.02
KRH36626	Soybean	cytosol	42.89	33.72
KRH11623	Soybean	cytosol	41.0	33.16
KRG93211	Soybean	cytosol	41.0	32.03
KRH13830	Soybean	cytosol	37.66	31.25
KRG94078	Soybean	cytosol, plastid	41.21	31.22
KRH44814	Soybean	cytosol	36.4	31.07
KRH07149	Soybean	cytosol	41.0	31.06
KRH43612	Soybean	cytosol	37.45	30.55
KRH40174	Soybean	cytosol	43.1	26.89
KRH48818	Soybean	cytosol	42.89	26.87
KRH01064	Soybean	cytosol	42.89	26.69
KRH66511	Soybean	nucleus	42.47	26.61
KRH62499	Soybean	cytosol	39.75	22.97
KRH56412	Soybean	cytosol	39.96	22.87
KRH32674	Soybean	cytosol	40.38	22.36
KRH30833	Soybean	cytosol	40.38	22.29
KRH23770	Soybean	cytosol	37.66	22.14
KRG96169	Soybean	cytosol	40.17	22.12
KRH67882	Soybean	cytosol	39.75	21.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100778383	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02009768	EnsemblPlantsGene:GLYMA_15G252700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1MJ40	InterPro:IPR000719	EnsemblPlants:KRH13630	ProteinID:KRH13630	ProteinID:KRH13630.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233BB91	SEG:seg

Description

hypothetical protein

Coordinates

chr15:-:48103315..48104751

Molecular Weight (calculated)

54472.1 Da

IEP (calculated)

9.788

GRAVY (calculated)

-0.391

Length

478 amino acids

Sequence
(BLAST)

001: MDEPTLLFPD TDLDLSFTST TTDRTTISAR ASLARTSSLT LSFNDRLSTF SAAENTTAAV TNRLPHRSAD PNWSAIQAAV NLSSDGRLHL RHLKLLRHLG
101: SGNLGRVFLC RLRDYDGAHF ALKVVDKDLL TAKKLSHAQT EAEILQTLDH PFLPTLYARI DVSHYTCLLI DFCPGGDLHS LLRRQPQFRL PLAAARFFAA
201: EVLVALEYLH ALGIVYRDLK PENVLMREDG HVMLSDFDLC FKSDVAPCVD FRAHSPRRVG PTNGCFSYNC HRSQDRRKEK LVAEFVAEPV TAFSRSSVGT
301: HEYLAPELVS GNGHGNGVDW WAFGVFVYEL LYGTTPFKGC SKEGTLRKIA SSKDVRFVHV AEREEPGMTE ARDLIEKLLV KDPKKRLGCA KGATEIKRHR
401: FFDGIKWPLI RTYRPPELKG LMRRNKSKVS CKSKRWWWWW KRLGHVVRTK GGKYNFFSNY SNNNNNYYHF VDDNYKVR

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.